RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FAM104BQ5XKR9 115 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 CLRN3Q8NCR9 226 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 IMMP2LQ96T52 175 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 PKD1P98161 4303 aa4.73□□□□□ -1.65
LPCAT3-209ENST00000540060 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 TRBV6-5A0A0K0K1A5 114 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 SDHAF1A6NFY7 115 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 NCR2O95944 276 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 APOC3P02656 99 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 MRPL51Q4U2R6 128 aaKnown RBP4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 KCNIP4Q6PIL6 250 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 NIT1Q86X76 327 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 C6orf223Q8N319 242 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 NRACQ8N912 160 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 BTF3L4Q96K17 158 aa4.72□□□□□ -1.65
LPCAT3-209ENST00000540060 PKHD1P08F94 4074 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 DNAH11Q96DT5 4516 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 TRBV25-1A0A075B6N4 114 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 SNAPINO95295 136 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IGHV3-33P01772 117 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IGHV3-30-3P0DP02 117 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 BTF3P20290 206 aaKnown RBP4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IQCJQ1A5X6 159 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 SVBPQ8N300 66 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 C10orf126Q8N4M7 172 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 TMEM70Q9BUB7 260 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 CHCHD7Q9BUK0 85 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 RPS10P5Q9NQ39 176 aa4.71□□□□□ -1.66
LPCAT3-209ENST00000540060 IGHV1-24A0A0C4DH33 117 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 IBA57-AS1B1ANH7 110 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 D6R8Y8 96 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 PPP1R17O96001 155 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 S100PP25815 95 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 POLR2KP53803 58 aaKnown RBP4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 COTL1Q14019 142 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 LAGE3Q14657 143 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 DEFB104AQ8WTQ1 72 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 CHCHD5Q9BSY4 110 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 ST20Q9HBF5 79 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 URGCP-MRPS24S4R325 110 aa4.7□□□□□ -1.66
LPCAT3-209ENST00000540060 TRBV24-1A0A075B6N3 115 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 A0A087WX48 190 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 PRSS29PA6NIE9 313 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 I3L3M4 83 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 TNFRSF6BO95407 300 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 TSHBP01222 138 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 NPYP01303 97 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 APCSP02743 223 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 PPBPP02775 128 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 CKS2P33552 79 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 AMTP48728 403 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 PKIAP61925 76 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 SUMO2P61956 95 aaKnown RBP4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 TMEM136Q6ZRR5 245 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 TMEM243Q9BU79 118 aa4.69□□□□□ -1.66
LPCAT3-209ENST00000540060 BIRC6Q9NR09 4857 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 A0A1B0GVY2 172 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 PHOX2AO14813 284 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 RBX1P62877 108 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 RPL32P62910 135 aaKnown RBP4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 GAGE6Q13070 117 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 NFE4Q86UQ8 179 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 ORMDL3Q8N138 153 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 Q8N976 141 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 PRELID3AQ96N28 172 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 C20orf78Q9BR46 151 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
LPCAT3-209ENST00000540060 TMEM262E9PQX1 116 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 VCYO14598 125 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 HLA-DQA1P01909 254 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 ESDP10768 282 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 PMCHP20382 165 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 ELOBQ15370 118 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 Q9HAA7 133 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 LAMTOR2Q9Y2Q5 125 aa4.67□□□□□ -1.66
LPCAT3-209ENST00000540060 IGLV4-60A0A075B6I1 120 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 TRAV8-3A0A0A6YYJ7 113 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 TGIF2-C20orf24A0A0A6YYL0 155 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 IGKV2-29A2NJV5 120 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms