RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 E9PLD3 99 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 K7EQD1 137 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 HINT1P49773 126 aaPredicted RBP7.34□□□□□ -1.23
SPARC-209ENST00000539687 APOC4P55056 127 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 TAL2Q16559 108 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.34□□□□□ -1.23
SPARC-209ENST00000539687 CSNK1G2-AS1Q8NCQ2 148 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 KIR2DL5BQ8NHK3 375 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 VCX2Q9H322 139 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 CST9LQ9H4G1 147 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 ZMAT5Q9UDW3 170 aaKnown RBP7.34□□□□□ -1.23
SPARC-209ENST00000539687 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.23
SPARC-209ENST00000539687 TRBV7-3A0A075B6L6 115 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 C11orf86A6NJI1 115 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 GIG44P09565 113 aaPredicted RBP7.33□□□□□ -1.24
SPARC-209ENST00000539687 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 C2orf91Q6ZV80 131 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 NFE4Q86UQ8 179 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
SPARC-209ENST00000539687 FN1P02751 2386 aaKnown RBP7.33□□□□□ -1.24
SPARC-209ENST00000539687 TRGV2A0A075B6R0 118 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 TRBV6-4A0A1B0GX49 114 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 P0DMU3 169 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 FAM231AP0DMU4 169 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 FAM231CP0DMU5 169 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 MPV17L2Q567V2 206 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
SPARC-209ENST00000539687 AGRNO00468 2067 aa7.31□□□□□ -1.24
SPARC-209ENST00000539687 RPL39P62891 51 aaKnown RBP7.31□□□□□ -1.24
SPARC-209ENST00000539687 ORAOV1Q8WV07 137 aa7.31□□□□□ -1.24
SPARC-209ENST00000539687 PRADC1Q9BSG0 188 aa7.31□□□□□ -1.24
SPARC-209ENST00000539687 NOP10Q9NPE3 64 aaKnown RBP7.31□□□□□ -1.24
SPARC-209ENST00000539687 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 H7C423 109 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
SPARC-209ENST00000539687 GAGE1Q13065 139 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 Q6ZTI0 123 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 AMELXQ99217 191 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 GTSF1LQ9H1H1 148 aa7.3□□□□□ -1.24
SPARC-209ENST00000539687 SONP18583 2426 aaKnown RBP7.29□□□□□ -1.24
SPARC-209ENST00000539687 JMJD1CQ15652 2540 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 IGLV4-69A0A075B6H9 119 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 IGKV2D-26A0A0A0MRZ7 120 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 TRGV4A0A0C4DH28 118 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 PRM2P04554 102 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 CHCHD7Q9BUK0 85 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 CHAC1Q9BUX1 264 aa7.29□□□□□ -1.24
SPARC-209ENST00000539687 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
SPARC-209ENST00000539687 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 LYRM9A8MSI8 78 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 GAGE7O76087 117 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 UBE2D3P61077 147 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 UBE2D2P62837 147 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 TMEM170BQ5T4T1 132 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 DGAT2L7PQ6IED9 249 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 Q6ZSN1 163 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 LINC00612Q8N6U2 182 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 PLEKHB2Q96CS7 222 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 ZNF479Q96JC4 524 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 COL6A5A8TX70 2615 aa7.28□□□□□ -1.24
SPARC-209ENST00000539687 TLN2Q9Y4G6 2542 aa7.27□□□□□ -1.25
SPARC-209ENST00000539687 ZNF25P17030 456 aaPredicted RBP7.27□□□□□ -1.25
SPARC-209ENST00000539687 LGALS3P17931 250 aaKnown RBP7.27□□□□□ -1.25
SPARC-209ENST00000539687 SLC25A29Q8N8R3 303 aa7.27□□□□□ -1.25
SPARC-209ENST00000539687 TEX48A0A1B0GUV7 120 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 TMEM238LA0A1B0GVL6 79 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 TINCRA0A1B0GVN0 87 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 A6NJY4 79 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 ZNF815PA8K554 130 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 H3BRM9 83 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 UBE2L6O14933 153 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 LEPROTO15243 131 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 SHISA2Q6UWI4 295 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 CEND1Q8N111 149 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
SPARC-209ENST00000539687 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 TM2D2Q9BX73 214 aa7.26□□□□□ -1.25
SPARC-209ENST00000539687 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 MIFP14174 115 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 GCSHP23434 173 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 TCTAP57738 103 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 TMEM243Q9BU79 118 aa7.25□□□□□ -1.25
SPARC-209ENST00000539687 GAGE12JA6NER3 117 aa7.24□□□□□ -1.25
SPARC-209ENST00000539687 J3QQQ9 107 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms