RNA–Protein interactions for RNA: ENST00000539595.5

TRPT1-208, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 1,809 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-208ENST00000539595 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
TRPT1-208ENST00000539595 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
TRPT1-208ENST00000539595 HIVEP1P15822 2718 aa12.92□□□□□ -0.34
TRPT1-208ENST00000539595 IGLV4-3A0A075B6K6 122 aa12.92□□□□□ -0.34
TRPT1-208ENST00000539595 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
TRPT1-208ENST00000539595 DAZ2Q13117 558 aaKnown RBP12.92□□□□□ -0.34
TRPT1-208ENST00000539595 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
TRPT1-208ENST00000539595 NOP10Q9NPE3 64 aaKnown RBP12.91□□□□□ -0.34
TRPT1-208ENST00000539595 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
TRPT1-208ENST00000539595 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 MYMXA0A1B0GTQ4 84 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 NPSP0C0P6 89 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 ZNRF2Q8NHG8 242 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 A6NDN8 102 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 SPATA3Q8NHX4 192 aa12.9□□□□□ -0.34
TRPT1-208ENST00000539595 IGHV3-38A0A0C4DH36 116 aa12.89□□□□□ -0.35
TRPT1-208ENST00000539595 HERVK_113P61574 105 aa12.89□□□□□ -0.35
TRPT1-208ENST00000539595 NFE4Q86UQ8 179 aa12.89□□□□□ -0.35
TRPT1-208ENST00000539595 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
TRPT1-208ENST00000539595 PHLDA1Q8WV24 401 aaPredicted RBP12.89□□□□□ -0.35
TRPT1-208ENST00000539595 INSL3P51460 131 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 COTL1Q14019 142 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 RRN3P1Q2M238 152 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 FAM104AQ969W3 186 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 VCX2Q9H322 139 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 GCSHP23434 173 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 TMEM170BQ5T4T1 132 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
TRPT1-208ENST00000539595 K7EQD1 137 aa12.87□□□□□ -0.35
TRPT1-208ENST00000539595 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
TRPT1-208ENST00000539595 CEMP1Q6PRD7 247 aaPredicted RBP12.86□□□□□ -0.35
TRPT1-208ENST00000539595 CITED1Q99966 193 aa12.86□□□□□ -0.35
TRPT1-208ENST00000539595 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
TRPT1-208ENST00000539595 NOTCH3Q9UM47 2321 aa12.86□□□□□ -0.35
TRPT1-208ENST00000539595 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.85□□□□□ -0.35
TRPT1-208ENST00000539595 IGKV2-29A2NJV5 120 aaPredicted RBP12.85□□□□□ -0.35
TRPT1-208ENST00000539595 FXYD2P54710 66 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 AMELXQ99217 191 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 OVOL2Q9BRP0 275 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 H3BRM9 83 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 GAGE7O76087 117 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 GAGE12FP0CL80 117 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 GAGE12GP0CL81 117 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 GAGE12IP0CL82 117 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 CRYBA4P53673 196 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 TAL2Q16559 108 aa12.85□□□□□ -0.35
TRPT1-208ENST00000539595 K7EP13 123 aa12.84□□□□□ -0.35
TRPT1-208ENST00000539595 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
TRPT1-208ENST00000539595 CEND1Q8N111 149 aa12.84□□□□□ -0.35
TRPT1-208ENST00000539595 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
TRPT1-208ENST00000539595 TM2D2Q9BX73 214 aa12.84□□□□□ -0.35
TRPT1-208ENST00000539595 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.35
TRPT1-208ENST00000539595 A0A0J9YXV3 536 aa12.83□□□□□ -0.35
TRPT1-208ENST00000539595 VAMP3Q15836 100 aa12.83□□□□□ -0.35
TRPT1-208ENST00000539595 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.35
TRPT1-208ENST00000539595 ZNF22P17026 224 aaPredicted RBP12.83□□□□□ -0.36
TRPT1-208ENST00000539595 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
TRPT1-208ENST00000539595 UBE2V1Q13404 147 aa12.82□□□□□ -0.36
TRPT1-208ENST00000539595 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
TRPT1-208ENST00000539595 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 CCL25O15444 150 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 PTTG1IPP53801 180 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 UBE2D3P61077 147 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 UBE2D2P62837 147 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 Q6ZUT4 128 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 DAZ4Q86SG3 579 aaKnown RBP12.81□□□□□ -0.36
TRPT1-208ENST00000539595 PLEKHB2Q96CS7 222 aa12.81□□□□□ -0.36
TRPT1-208ENST00000539595 DAZ3Q9NR90 486 aaKnown RBP12.81□□□□□ -0.36
TRPT1-208ENST00000539595 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 CIDEAO60543 219 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
TRPT1-208ENST00000539595 GAGE4Q13068 117 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 GAGE5Q13069 117 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
TRPT1-208ENST00000539595 SCGB1D4Q6XE38 83 aa12.79□□□□□ -0.36
TRPT1-208ENST00000539595 J3QQQ9 107 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 VWFP04275 2813 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 LEPROTO15243 131 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 AMMECR1LQ6DCA0 310 aa12.78□□□□□ -0.36
TRPT1-208ENST00000539595 TENM1Q9UKZ4 2725 aa12.77□□□□□ -0.36
TRPT1-208ENST00000539595 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
TRPT1-208ENST00000539595 K7ERJ3 54 aa12.77□□□□□ -0.37
TRPT1-208ENST00000539595 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.37
TRPT1-208ENST00000539595 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.37
TRPT1-208ENST00000539595 NHP2Q9NX24 153 aaKnown RBP12.77□□□□□ -0.37
TRPT1-208ENST00000539595 TRGV4A0A0C4DH28 118 aa12.76□□□□□ -0.37
TRPT1-208ENST00000539595 H3BUT2 72 aa12.76□□□□□ -0.37
TRPT1-208ENST00000539595 NAA38Q9BRA0 125 aaKnown RBP12.76□□□□□ -0.37
TRPT1-208ENST00000539595 X6R8D5 127 aa12.76□□□□□ -0.37
TRPT1-208ENST00000539595 A0A0J9YY99 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms