RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 MAP1LC3AQ9H492 121 aa13.12□□□□□ -0.31
LINC00943-205ENST00000539315 Q9UF83 564 aa13.12□□□□□ -0.31
LINC00943-205ENST00000539315 SDHAF1A6NFY7 115 aa13.11□□□□□ -0.31
LINC00943-205ENST00000539315 PRSS47A8MTI9 375 aa13.11□□□□□ -0.31
LINC00943-205ENST00000539315 DAZ4Q86SG3 579 aaKnown RBP13.11□□□□□ -0.31
LINC00943-205ENST00000539315 DAZ3Q9NR90 486 aaKnown RBP13.11□□□□□ -0.31
LINC00943-205ENST00000539315 NUDT3O95989 172 aa13.1□□□□□ -0.31
LINC00943-205ENST00000539315 PMCHP20382 165 aa13.1□□□□□ -0.31
LINC00943-205ENST00000539315 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
LINC00943-205ENST00000539315 UBE2D3P61077 147 aa13.1□□□□□ -0.31
LINC00943-205ENST00000539315 UBE2D2P62837 147 aa13.1□□□□□ -0.31
LINC00943-205ENST00000539315 RPL32P62910 135 aaKnown RBP13.1□□□□□ -0.31
LINC00943-205ENST00000539315 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
LINC00943-205ENST00000539315 LOC389332A0A1B0GUA5 103 aa13.09□□□□□ -0.31
LINC00943-205ENST00000539315 TNP2Q05952 138 aa13.09□□□□□ -0.31
LINC00943-205ENST00000539315 PRSS3P2Q8NHM4 247 aa13.09□□□□□ -0.31
LINC00943-205ENST00000539315 TMEM70Q9BUB7 260 aa13.09□□□□□ -0.31
LINC00943-205ENST00000539315 I3L3M4 83 aa13.08□□□□□ -0.32
LINC00943-205ENST00000539315 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
LINC00943-205ENST00000539315 A0A096LPF7 62 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 TCAPO15273 167 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 TMEM97Q5BJF2 176 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 SMIM2Q9BVW6 85 aa13.07□□□□□ -0.32
LINC00943-205ENST00000539315 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
LINC00943-205ENST00000539315 LINC00694P0DN24 101 aa13.06□□□□□ -0.32
LINC00943-205ENST00000539315 RAB5BP61020 215 aa13.06□□□□□ -0.32
LINC00943-205ENST00000539315 Q8N8P6 123 aa13.06□□□□□ -0.32
LINC00943-205ENST00000539315 C18orf32Q8TCD1 76 aa13.06□□□□□ -0.32
LINC00943-205ENST00000539315 HERC1Q15751 4861 aa13.06□□□□□ -0.32
LINC00943-205ENST00000539315 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 CDK2AP2O75956 126 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 Q0VG73 95 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 COTL1Q14019 142 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
LINC00943-205ENST00000539315 FCER1GP30273 86 aa13.04□□□□□ -0.32
LINC00943-205ENST00000539315 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
LINC00943-205ENST00000539315 IQCJQ1A5X6 159 aa13.04□□□□□ -0.32
LINC00943-205ENST00000539315 FA2HQ7L5A8 372 aa13.04□□□□□ -0.32
LINC00943-205ENST00000539315 K7EMI3 77 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BKO60814 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BJP06899 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BOP23527 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BBP33778 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BDP58876 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BCP62807 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST2H2BEQ16778 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.03□□□□□ -0.32
LINC00943-205ENST00000539315 NIT1Q86X76 327 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BHQ93079 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BNQ99877 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 HIST1H2BMQ99879 126 aa13.03□□□□□ -0.32
LINC00943-205ENST00000539315 NBDYA0A0U1RRE5 68 aa13.02□□□□□ -0.33
LINC00943-205ENST00000539315 LINC00614P0C842 121 aa13.02□□□□□ -0.33
LINC00943-205ENST00000539315 TIRAPP58753 221 aa13.02□□□□□ -0.33
LINC00943-205ENST00000539315 LYPD5Q6UWN5 251 aa13.02□□□□□ -0.33
LINC00943-205ENST00000539315 MAPKAPK5-AS1Q8N8E1 139 aa13.02□□□□□ -0.33
LINC00943-205ENST00000539315 G0S2P27469 103 aa13□□□□□ -0.33
LINC00943-205ENST00000539315 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
LINC00943-205ENST00000539315 C6orf223Q8N319 242 aa13□□□□□ -0.33
LINC00943-205ENST00000539315 TRBV6-8A0A0A6YYG3 113 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 IGHV1-24A0A0C4DH33 117 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 TSHBP01222 138 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 CCL18P55774 89 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 LAGE3Q14657 143 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
LINC00943-205ENST00000539315 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
LINC00943-205ENST00000539315 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
LINC00943-205ENST00000539315 AMTP48728 403 aa12.98□□□□□ -0.33
LINC00943-205ENST00000539315 ESRGQ1W209 222 aa12.98□□□□□ -0.33
LINC00943-205ENST00000539315 LELP1Q5T871 98 aa12.98□□□□□ -0.33
LINC00943-205ENST00000539315 RNASEKQ6P5S7 137 aaKnown RBP12.98□□□□□ -0.33
LINC00943-205ENST00000539315 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
LINC00943-205ENST00000539315 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 NDUFA6P56556 154 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 NTM-AS1Q6ZSK4 140 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 Q8N1X5 172 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
LINC00943-205ENST00000539315 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
LINC00943-205ENST00000539315 TMEM243Q9BU79 118 aa12.96□□□□□ -0.33
LINC00943-205ENST00000539315 S100A6P06703 90 aa12.95□□□□□ -0.34
LINC00943-205ENST00000539315 UBE2L6O14933 153 aa12.94□□□□□ -0.34
LINC00943-205ENST00000539315 HSBP1O75506 76 aa12.94□□□□□ -0.34
LINC00943-205ENST00000539315 URB1-AS1Q96HZ7 61 aa12.94□□□□□ -0.34
LINC00943-205ENST00000539315 CHCHD5Q9BSY4 110 aa12.94□□□□□ -0.34
LINC00943-205ENST00000539315 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 H7C423 109 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 SERF1AO75920 110 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 ESDP10768 282 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 PKIAP61925 76 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 CHCHD7Q9BUK0 85 aa12.93□□□□□ -0.34
LINC00943-205ENST00000539315 COA6Q5JTJ3 125 aaKnown RBP12.92□□□□□ -0.34
LINC00943-205ENST00000539315 C20orf203Q8NBC4 194 aa12.92□□□□□ -0.34
LINC00943-205ENST00000539315 KRTAP1-5Q9BYS1 174 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms