RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 NTN5Q8WTR8 489 aaPredicted RBP9.36□□□□□ -0.91
CCND1-204ENST00000539241 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 DNAJC30Q96LL9 226 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 Q9HAA7 133 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 MYCBP2O75592 4640 aa9.36□□□□□ -0.91
CCND1-204ENST00000539241 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
CCND1-204ENST00000539241 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 RAB4AP20338 218 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 MRAP2Q96G30 205 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
CCND1-204ENST00000539241 HAMPP81172 84 aa9.34□□□□□ -0.91
CCND1-204ENST00000539241 GTSF1LQ9H1H1 148 aa9.34□□□□□ -0.91
CCND1-204ENST00000539241 Q8N814 137 aa9.33□□□□□ -0.92
CCND1-204ENST00000539241 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
CCND1-204ENST00000539241 TMEM70Q9BUB7 260 aa9.33□□□□□ -0.92
CCND1-204ENST00000539241 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
CCND1-204ENST00000539241 ATRAIDQ6UW56 229 aa9.32□□□□□ -0.92
CCND1-204ENST00000539241 DAZ4Q86SG3 579 aaKnown RBP9.32□□□□□ -0.92
CCND1-204ENST00000539241 RPL39LQ96EH5 51 aaKnown RBP9.32□□□□□ -0.92
CCND1-204ENST00000539241 DAZ3Q9NR90 486 aaKnown RBP9.32□□□□□ -0.92
CCND1-204ENST00000539241 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
CCND1-204ENST00000539241 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
CCND1-204ENST00000539241 PPP1R17O96001 155 aa9.31□□□□□ -0.92
CCND1-204ENST00000539241 LAGE3Q14657 143 aa9.31□□□□□ -0.92
CCND1-204ENST00000539241 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
CCND1-204ENST00000539241 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
CCND1-204ENST00000539241 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
CCND1-204ENST00000539241 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 NCR2O95944 276 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 PPBPP02775 128 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 CKS2P33552 79 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
CCND1-204ENST00000539241 ELOBQ15370 118 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 COX19Q49B96 90 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 Q8N3U1 123 aa9.3□□□□□ -0.92
CCND1-204ENST00000539241 TRBV24-1A0A075B6N3 115 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 TMEM136Q6ZRR5 245 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 NRACQ8N912 160 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 SMCO4Q9NRQ5 59 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
CCND1-204ENST00000539241 SDHAF1A6NFY7 115 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 D6R8Y8 96 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 WFDC2Q14508 124 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
CCND1-204ENST00000539241 TRBV6-8A0A0A6YYG3 113 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 PHOX2AO14813 284 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 MT-ND6P03923 174 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
CCND1-204ENST00000539241 YPEL4Q96NS1 127 aa9.27□□□□□ -0.93
CCND1-204ENST00000539241 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
CCND1-204ENST00000539241 COTL1Q14019 142 aa9.26□□□□□ -0.93
CCND1-204ENST00000539241 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
CCND1-204ENST00000539241 C20orf78Q9BR46 151 aa9.26□□□□□ -0.93
CCND1-204ENST00000539241 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
CCND1-204ENST00000539241 I3L3M4 83 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 NPYP01303 97 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 APCSP02743 223 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 NTM-AS1Q6ZSK4 140 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
CCND1-204ENST00000539241 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 IGHV1-24A0A0C4DH33 117 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 LECT2O14960 151 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 PMCHP20382 165 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 RPL32P62910 135 aaKnown RBP9.24□□□□□ -0.93
CCND1-204ENST00000539241 IQCJQ1A5X6 159 aa9.24□□□□□ -0.93
CCND1-204ENST00000539241 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
CCND1-204ENST00000539241 VCYO14598 125 aa9.23□□□□□ -0.93
CCND1-204ENST00000539241 AMTP48728 403 aa9.23□□□□□ -0.93
CCND1-204ENST00000539241 Q6ZSA8 131 aa9.23□□□□□ -0.93
CCND1-204ENST00000539241 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
CCND1-204ENST00000539241 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
CCND1-204ENST00000539241 ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 PKIAP61925 76 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 NIT1Q86X76 327 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 RMI2Q96E14 147 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
CCND1-204ENST00000539241 MRPL18Q9H0U6 180 aaKnown RBP9.22□□□□□ -0.93
CCND1-204ENST00000539241 TSHBP01222 138 aa9.21□□□□□ -0.94
CCND1-204ENST00000539241 S100A1P23297 94 aa9.21□□□□□ -0.94
CCND1-204ENST00000539241 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms