RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.37
GGA3-202ENST00000538886 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
GGA3-202ENST00000538886 CHCHD5Q9BSY4 110 aa6.52□□□□□ -1.37
GGA3-202ENST00000538886 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
GGA3-202ENST00000538886 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
GGA3-202ENST00000538886 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 SMKR1H3BMG3 65 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 IGKCP01834 107 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 TCRAP04437 139 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 TMEM75Q8N9X5 138 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 MGPP08493 103 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 TWIST1Q15672 202 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 ZNF56Q15929 161 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 ANKRD29Q8N6D5 301 aa6.51□□□□□ -1.37
GGA3-202ENST00000538886 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 Q6ZQT7 251 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
GGA3-202ENST00000538886 LEPP41159 167 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 DAD1P61803 113 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 ZFP2Q6ZN57 461 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 SBSPONQ8IVN8 264 aa6.5□□□□□ -1.37
GGA3-202ENST00000538886 A0A096LPF7 62 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 RHODO00212 210 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 DPM2O94777 84 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 H3BMM0 161 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 K7EIL1 84 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 ORMDL3Q8N138 153 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 TMEM126AQ9H061 195 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 A0A087WX48 190 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 A0A0J9YY99 117 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
GGA3-202ENST00000538886 FAM167A-AS1Q96KT0 104 aa6.49□□□□□ -1.37
GGA3-202ENST00000538886 TRGV4A0A0C4DH28 118 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 A0A0J9YX75 114 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 HERVK_113P61574 105 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 PDE6HQ13956 83 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 TRAV21A0A0B4J279 112 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 J3KT08 172 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 NHLRC4P0CG21 123 aaPredicted RBP6.48□□□□□ -1.37
GGA3-202ENST00000538886 IGF2BP2-AS1Q96M15 143 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 MUC4Q99102 2169 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 RPL13AP40429 203 aaKnown RBP6.48□□□□□ -1.37
GGA3-202ENST00000538886 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
GGA3-202ENST00000538886 ANK3Q12955 4377 aaKnown RBP6.48□□□□□ -1.37
GGA3-202ENST00000538886 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
GGA3-202ENST00000538886 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 PMVKQ15126 192 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 CFAP126Q5VTH2 177 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 ATP6V0E2Q8NHE4 81 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 SLC25A20O43772 301 aa6.47□□□□□ -1.37
GGA3-202ENST00000538886 KLK5Q9Y337 293 aaPredicted RBP6.47□□□□□ -1.37
GGA3-202ENST00000538886 A0A0J9YWU9 116 aa6.46□□□□□ -1.37
GGA3-202ENST00000538886 GNRH2O43555 120 aa6.46□□□□□ -1.37
GGA3-202ENST00000538886 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 ASIPP42127 132 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 SPANXA1Q9NS26 97 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
GGA3-202ENST00000538886 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 MYMXA0A1B0GTQ4 84 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 LINC00322Q6ZN03 302 aaPredicted RBP6.45□□□□□ -1.38
GGA3-202ENST00000538886 LYPD1Q8N2G4 141 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 DNAJC30Q96LL9 226 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 HIGD1BQ9P298 99 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 RBMY1BA6NDE4 496 aaKnown RBP6.45□□□□□ -1.38
GGA3-202ENST00000538886 RBMY1EA6NEQ0 496 aaKnown RBP6.45□□□□□ -1.38
GGA3-202ENST00000538886 RBMY1DP0C7P1 496 aaKnown RBP6.45□□□□□ -1.38
GGA3-202ENST00000538886 PRADC1Q9BSG0 188 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
GGA3-202ENST00000538886 PKIGQ9Y2B9 76 aa6.45□□□□□ -1.38
GGA3-202ENST00000538886 A0A087WWL8 130 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 HERVK_113P63121 156 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 FMC1Q96HJ9 113 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 IGHV1OR15-1A0A075B7D0 117 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
GGA3-202ENST00000538886 PRO0461Q9UI25 63 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 U3KQK5 164 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 SPART-AS1P0CW21 52 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
GGA3-202ENST00000538886 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
GGA3-202ENST00000538886 MORN3Q6PF18 240 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms