RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 FAM231CP0DMU5 169 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 PRNTQ86SH4 94 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 MUC7Q8TAX7 377 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 GTSF1Q8WW33 167 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 PLEKHB2Q96CS7 222 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 FAM19A4Q96LR4 140 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 XCL2Q9UBD3 114 aa2.62□□□□□ -1.99
PTPN22-211ENST00000538253 TRAV8-2A0A0B4J237 113 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 ZNF324O75467 553 aaPredicted RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 DEFB135Q30KP9 77 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 ZFP2Q6ZN57 461 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 Q86TA4 180 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RMI2Q96E14 147 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 SMIM7Q9BQ49 75 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 TMEM191AQ9H0A3 160 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 AGPAT4-IT1Q9H0P7 198 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 PHLDA3Q9Y5J5 127 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 ATRQ13535 2644 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 IZUMO1RA6ND01 250 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 NDUFB4O95168 129 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 GAGE2AQ6NT46 116 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 LINC00526Q96FQ7 95 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 GFRA4Q9GZZ7 299 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 IGHV3OR16-12A0A075B7B8 117 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RBMY1BA6NDE4 496 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RBMY1EA6NEQ0 496 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RBMY1DP0C7P1 496 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 MGST1P10620 155 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RPL13AP40429 203 aaKnown RBP2.61□□□□□ -1.99
PTPN22-211ENST00000538253 CCL18P55774 89 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 RHOHQ15669 191 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 SPINK13Q1W4C9 94 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 UBE2DNLQ8IWF7 75 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 FAM19A2Q8N3H0 131 aa2.61□□□□□ -1.99
PTPN22-211ENST00000538253 TRGV4A0A0C4DH28 118 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 UQCRQO14949 82 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 IGKV3-20P01619 116 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 VPREB1P12018 145 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 RPL23P62829 140 aaKnown RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 SRSF9Q13242 221 aaKnown RBP eCLIP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 SERTAD4-AS1Q5TG53 156 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 CEMP1Q6PRD7 247 aaPredicted RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 AMTNQ6UX39 209 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 PRR26Q8N8Z3 221 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 DSCR8Q96T75 97 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 ICOSQ9Y6W8 199 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 IGHV4-28A0A0C4DH34 117 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 LTAP01374 205 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 GCSHP23434 173 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 SPANXN1Q5VSR9 72 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 PPDPFLQ8WWR9 84 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 MRPL18Q9H0U6 180 aaKnown RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 IL36BQ9NZH7 164 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 PRO0255Q9UI72 69 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 HHLA3Q9XRX5 114 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 DNAH14Q0VDD8 3507 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 IGKV2-40A0A087WW87 121 aaPredicted RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 TRAV12-3A0A0B4J271 114 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 E9PLD3 99 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 DPM2O94777 84 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 IGKV2D-40P01614 121 aaPredicted RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 RPL36AP83881 106 aaKnown RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 SBSPONQ8IVN8 264 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 TSKUQ8WUA8 353 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 RPL36ALQ969Q0 106 aaKnown RBP2.6□□□□□ -1.99
PTPN22-211ENST00000538253 PMCHL2Q9BQD1 86 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
PTPN22-211ENST00000538253 M0R3E3 92 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 OR5AL1P0C617 328 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 COX8AP10176 69 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 TMEM136Q6ZRR5 245 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 RNF182Q8N6D2 247 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 LINC00479Q96M42 142 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 RPP21Q9H633 154 aaKnown RBP2.59□□□□□ -1.99
PTPN22-211ENST00000538253 NOTCH1P46531 2555 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 PLXNB1O43157 2135 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 OTOGQ6ZRI0 2925 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 DEFB131BA0A096LNP1 70 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 TRGV1A0A0A0MS02 117 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 LORP23490 312 aaPredicted RBP2.59□□□□□ -1.99
PTPN22-211ENST00000538253 HLA-DMBP28068 263 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 CENPWQ5EE01 88 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 ATP5L2Q7Z4Y8 100 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 ZFAND2AQ8N6M9 145 aa2.59□□□□□ -1.99
PTPN22-211ENST00000538253 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -2
PTPN22-211ENST00000538253 DMDP11532 3685 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 TRBV6-4A0A1B0GX49 114 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 SH2D1AO60880 128 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 NDUFC2O95298 119 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 CFAP126Q5VTH2 177 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 ANKRD29Q8N6D5 301 aa2.59□□□□□ -2
PTPN22-211ENST00000538253 PHLDA1Q8WV24 401 aaPredicted RBP2.59□□□□□ -2
PTPN22-211ENST00000538253 GNB1LQ9BYB4 327 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms