RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 IGHV4-59P01825 116 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 LGALS3P17931 250 aaKnown RBP4.18□□□□□ -1.74
VPS33A-203ENST00000536212 PSMB2P49721 201 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 INSL3P51460 131 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 EMP1P54849 157 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 SPINK13Q1W4C9 94 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 C10orf99Q6UWK7 81 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 TMEM263Q8WUH6 116 aaKnown RBP4.18□□□□□ -1.74
VPS33A-203ENST00000536212 PPDPFLQ8WWR9 84 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 CARD19Q96LW7 228 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 LINC00467Q9BRT7 94 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 FRYQ5TBA9 3013 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 WDFY4Q6ZS81 3184 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 TRAV12-2A0A075B6T6 113 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 RBMY1A1P0DJD3 496 aaKnown RBP4.17□□□□□ -1.74
VPS33A-203ENST00000536212 RBMY1CP0DJD4 496 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 MRPS36P82909 103 aaKnown RBP4.17□□□□□ -1.74
VPS33A-203ENST00000536212 RBMY1FQ15415 496 aaKnown RBP4.17□□□□□ -1.74
VPS33A-203ENST00000536212 TTC32Q5I0X7 151 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 FAM74A4Q5TZK3 123 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 TEN1Q86WV5 123 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 UBE2E2Q96LR5 201 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 OPRPNQ99935 248 aaPredicted RBP4.17□□□□□ -1.74
VPS33A-203ENST00000536212 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 ZNF702PQ9H963 129 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 MUC4Q99102 2169 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 LOC400499M0QZD8 3231 aa4.17□□□□□ -1.74
VPS33A-203ENST00000536212 ABCA4P78363 2273 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
VPS33A-203ENST00000536212 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 A8MWV9 139 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 H3BMM0 161 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 IFITM1P13164 125 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 HOXD3P31249 432 aaPredicted RBP4.16□□□□□ -1.74
VPS33A-203ENST00000536212 SYNJ2BPP57105 145 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 ZNF415Q09FC8 603 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 MUSTN1Q8IVN3 82 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 Q8N2B8 174 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 BBC3Q96PG8 261 aaPredicted RBP4.16□□□□□ -1.74
VPS33A-203ENST00000536212 LITAFQ99732 161 aa4.16□□□□□ -1.74
VPS33A-203ENST00000536212 ANKHD1Q8IWZ3 2542 aaKnown RBP4.15□□□□□ -1.74
VPS33A-203ENST00000536212 IGHV1-58A0A0C4DH39 117 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 TINCRA0A1B0GVN0 87 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 RBMY1BA6NDE4 496 aaKnown RBP4.15□□□□□ -1.75
VPS33A-203ENST00000536212 RBMY1EA6NEQ0 496 aaKnown RBP4.15□□□□□ -1.75
VPS33A-203ENST00000536212 KNCNA6PVL3 124 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 TIMM17BO60830 172 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 RBMY1DP0C7P1 496 aaKnown RBP4.15□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 Q6ZUT4 128 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 DEFB104AQ8WTQ1 72 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 CHCHD7Q9BUK0 85 aa4.15□□□□□ -1.75
VPS33A-203ENST00000536212 SPENQ96T58 3664 aaKnown RBP4.15□□□□□ -1.75
VPS33A-203ENST00000536212 BDP1A6H8Y1 2624 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 AGRNO00468 2067 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 IGLV5-45A0A087WSX0 123 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV3-53P01767 116 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 ATP5G1P05496 136 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 CD28P10747 220 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 NDUFV3P56181 108 aaKnown RBP4.14□□□□□ -1.75
VPS33A-203ENST00000536212 PROK1P58294 105 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 DEFB131AP59861 70 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 GAGE2BQ13066 116 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 MRPL23Q16540 153 aaKnown RBP4.14□□□□□ -1.75
VPS33A-203ENST00000536212 GAGE2EQ4V326 116 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 C11orf72Q8NBR9 251 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 TIMM21Q9BVV7 248 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 UBE2D4Q9Y2X8 147 aa4.14□□□□□ -1.75
VPS33A-203ENST00000536212 A0A0U1RRA0 63 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 C9JAW5 83 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 SLC25A20O43772 301 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 SCGB1C2P0DMR2 95 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV4-31P0DP07 118 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 LINC01620Q4KN68 170 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 SFTA2Q6UW10 78 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 FAM19A3Q7Z5A8 133 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 VSIG2Q96IQ7 327 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 BSNQ9UPA5 3926 aa4.13□□□□□ -1.75
VPS33A-203ENST00000536212 GVINP1Q7Z2Y8 2422 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 CEP250Q9BV73 2442 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 RP1L1Q8IWN7 2480 aaPredicted RBP4.12□□□□□ -1.75
VPS33A-203ENST00000536212 TTC28Q96AY4 2481 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 TRAV8-3A0A0A6YYJ7 113 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 SNCGO76070 127 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 RPL13AP40429 203 aaKnown RBP4.12□□□□□ -1.75
VPS33A-203ENST00000536212 XGP55808 180 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms