RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-215	ENST00000536145	DAZ2	Q13117	558 aa	Known RBP	5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	RBMY1F	Q15415	496 aa	Known RBP	5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145		Q6ZSN1	163 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	DAZ4	Q86SG3	579 aa	Known RBP	5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145		Q8N2B8	174 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	OBSCN-AS1	Q96MR7	158 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	FAM218A	Q96MZ4	157 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	LINC00467	Q9BRT7	94 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	UPK3B	Q9BT76	320 aa		5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	DAZ3	Q9NR90	486 aa	Known RBP	5.01	□□□□□ -1.61
CPSF7-215	ENST00000536145	IGKV3-7	A0A075B6H7	116 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	TRAV12-2	A0A075B6T6	113 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	SMIM9	A6NGZ8	99 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145		J3KT08	172 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	BAALC-AS2	P0C853	105 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	PF4V1	P10720	104 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	COX6A2	Q02221	97 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	C5orf47	Q569G3	176 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	RNASE13	Q5GAN3	156 aa	Known RBP	5	□□□□□ -1.61
CPSF7-215	ENST00000536145		Q6JHZ5	121 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	ZNF625	Q96I27	306 aa	Predicted RBP	5	□□□□□ -1.61
CPSF7-215	ENST00000536145	CDKN2A-AS1	Q9UH64	79 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	KLK5	Q9Y337	293 aa	Predicted RBP	5	□□□□□ -1.61
CPSF7-215	ENST00000536145	FRYL	O94915	3013 aa		5	□□□□□ -1.61
CPSF7-215	ENST00000536145	LOC107984640	A0A0U1RRK4	108 aa		4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145	WIPF1	O43516	503 aa		4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145	RPL28	P46779	137 aa	Known RBP	4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145	ZNF415	Q09FC8	603 aa		4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145	SPINK13	Q1W4C9	94 aa		4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145		Q9UF83	564 aa		4.99	□□□□□ -1.61
CPSF7-215	ENST00000536145	DCHS1	Q96JQ0	3298 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	IGHV3OR16-12	A0A075B7B8	117 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	SMIM1	B2RUZ4	78 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145		F5H768	121 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	ATOX1	O00244	68 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	RS1	O15537	224 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	IGHV3-53	P01767	116 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	LINC00242	Q5T6M2	205 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	CYSTM1	Q9H1C7	97 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	ZNF292	O60281	2723 aa		4.98	□□□□□ -1.61
CPSF7-215	ENST00000536145	CFAP54	Q96N23	3096 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	PKDREJ	Q9NTG1	2253 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	RBMY1B	A6NDE4	496 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	RBMY1E	A6NEQ0	496 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	CCL21	O00585	134 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	RBMY1D	P0C7P1	496 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	INAFM2	P0DMQ5	153 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	MAL	P21145	153 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	RPL18A	Q02543	176 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	CIRBP	Q14011	172 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	GAGE2A	Q6NT46	116 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	BPESC1	Q9GZL8	116 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145		Q9H8V8	135 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	SPTBN2	O15020	2390 aa		4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	PRRC2A	P48634	2157 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-215	ENST00000536145	PIEZO1	Q92508	2521 aa		4.96	□□□□□ -1.61
CPSF7-215	ENST00000536145	TMEM89	A2RUT3	159 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	OXT	P01178	125 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGKV3-20	P01619	116 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	PF4	P02776	101 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	BLCAP	P62952	87 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	OXLD1	Q5BKU9	147 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	C11orf72	Q8NBR9	251 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	COPS9	Q8WXC6	57 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	PIMREG	Q9BSJ6	248 aa		4.96	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGHV3-73	A0A0B4J1V6	119 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	hADV29S1	A0JD25	119 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	PSMB8	P28062	276 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	ATP5J2	P56134	94 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	TMEM258	P61165	79 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	SNRPD3	P62318	126 aa	Known RBP	4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	KLRB1	Q12918	225 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	LY6E	Q16553	131 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	C9orf129	Q5T035	196 aa	Known RBP	4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	HIST2H2BC	Q6DN03	193 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	HIST2H2BD	Q6DRA6	164 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	PRIMA1	Q86XR5	153 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	DPH3	Q96FX2	82 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	DMXL1	Q9Y485	3027 aa		4.95	□□□□□ -1.62
CPSF7-215	ENST00000536145	ROS1	P08922	2347 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGKV2-28	A0A075B6P5	120 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	TRAV13-2	A0A0B4J235	113 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	KNCN	A6PVL3	124 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145		H3BUX3	64 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGKV2D-28	P01615	120 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	BRD3OS	Q6XYD6	125 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	SERP2	Q8N6R1	65 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	IL17D	Q8TAD2	202 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145		Q96MF0	132 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	OVOL2	Q9BRP0	275 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	POLE	Q07864	2286 aa		4.94	□□□□□ -1.62
CPSF7-215	ENST00000536145	NACA	E9PAV3	2078 aa		4.93	□□□□□ -1.62
CPSF7-215	ENST00000536145	CELSR3	Q9NYQ7	3312 aa		4.93	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGHV3-38	A0A0C4DH36	116 aa		4.93	□□□□□ -1.62
CPSF7-215	ENST00000536145	EPM2A	B3EWF7	344 aa		4.93	□□□□□ -1.62
CPSF7-215	ENST00000536145	IGHV4-38-2	P0DP08	117 aa		4.93	□□□□□ -1.62
CPSF7-215	ENST00000536145		Q5XG85	94 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms