RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
PAAF1-207ENST00000536003 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
PAAF1-207ENST00000536003 BIN3Q9NQY0 253 aa10.01□□□□□ -0.81
PAAF1-207ENST00000536003 P01737 135 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 HLA-DQA1P01909 254 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 GAGE6Q13070 117 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 SMIM12Q96EX1 92 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 SMIM7Q9BQ49 75 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 NAT8Q9UHE5 227 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 LRP1Q07954 4544 aaKnown RBP10□□□□□ -0.81
PAAF1-207ENST00000536003 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
PAAF1-207ENST00000536003 RBX1P62877 108 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
PAAF1-207ENST00000536003 DEFB104AQ8WTQ1 72 aa9.99□□□□□ -0.81
PAAF1-207ENST00000536003 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
PAAF1-207ENST00000536003 TRBV25-1A0A075B6N4 114 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 K7EN84 100 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 CACNG7P62955 275 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 TMEM241Q24JQ0 296 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
PAAF1-207ENST00000536003 CTRLP40313 264 aa9.97□□□□□ -0.81
PAAF1-207ENST00000536003 MIAQ16674 131 aa9.97□□□□□ -0.81
PAAF1-207ENST00000536003 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
PAAF1-207ENST00000536003 NUDT11Q96G61 164 aa9.97□□□□□ -0.81
PAAF1-207ENST00000536003 RNASE7Q9H1E1 156 aaKnown RBP9.97□□□□□ -0.81
PAAF1-207ENST00000536003 NTF3P20783 257 aa9.96□□□□□ -0.81
PAAF1-207ENST00000536003 TMEM97Q5BJF2 176 aa9.96□□□□□ -0.81
PAAF1-207ENST00000536003 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.81
PAAF1-207ENST00000536003 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
PAAF1-207ENST00000536003 PKIAP61925 76 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
PAAF1-207ENST00000536003 ADIRFQ15847 76 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.82
PAAF1-207ENST00000536003 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 XKRY2A2RUG3 117 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 F2Z2F3 143 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 H7C1H1 209 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 PRSS1P07477 247 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
PAAF1-207ENST00000536003 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 TRAV26-2A0A0B4J265 109 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
PAAF1-207ENST00000536003 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
PAAF1-207ENST00000536003 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
PAAF1-207ENST00000536003 FAT3Q8TDW7 4589 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 C5orf52A6NGY3 159 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
PAAF1-207ENST00000536003 REG3AQ06141 175 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 PKHD1L1Q86WI1 4243 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 TRBV24-1A0A075B6N3 115 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 S100A6P06703 90 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
PAAF1-207ENST00000536003 LINC00518Q8N0U6 118 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 NIT2Q9NQR4 276 aa9.93□□□□□ -0.82
PAAF1-207ENST00000536003 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
PAAF1-207ENST00000536003 TWIST1Q15672 202 aa9.92□□□□□ -0.82
PAAF1-207ENST00000536003 ANAPC16Q96DE5 110 aa9.92□□□□□ -0.82
PAAF1-207ENST00000536003 PGLYRP4Q96LB8 373 aa9.92□□□□□ -0.82
PAAF1-207ENST00000536003 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
PAAF1-207ENST00000536003 AKR1D1P51857 326 aa9.91□□□□□ -0.82
PAAF1-207ENST00000536003 GATD1Q8NB37 220 aa9.91□□□□□ -0.82
PAAF1-207ENST00000536003 PANO1I0J062 215 aa9.9□□□□□ -0.82
PAAF1-207ENST00000536003 LINC01551Q86U37 167 aa9.9□□□□□ -0.82
PAAF1-207ENST00000536003 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
PAAF1-207ENST00000536003 WDR73Q6P4I2 378 aa9.89□□□□□ -0.83
PAAF1-207ENST00000536003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
PAAF1-207ENST00000536003 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
PAAF1-207ENST00000536003 S100PP25815 95 aa9.89□□□□□ -0.83
PAAF1-207ENST00000536003 AMTP48728 403 aa9.89□□□□□ -0.83
PAAF1-207ENST00000536003 FABP9Q0Z7S8 132 aa9.88□□□□□ -0.83
PAAF1-207ENST00000536003 COTL1Q14019 142 aa9.88□□□□□ -0.83
PAAF1-207ENST00000536003 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
PAAF1-207ENST00000536003 J3QL48 77 aa9.87□□□□□ -0.83
PAAF1-207ENST00000536003 PPP1R2P9O14990 202 aa9.87□□□□□ -0.83
PAAF1-207ENST00000536003 TRGC2P03986 189 aa9.87□□□□□ -0.83
PAAF1-207ENST00000536003 PHOX2AO14813 284 aa9.86□□□□□ -0.83
PAAF1-207ENST00000536003 UBE2L6O14933 153 aa9.86□□□□□ -0.83
PAAF1-207ENST00000536003 S100A8P05109 93 aa9.86□□□□□ -0.83
PAAF1-207ENST00000536003 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
PAAF1-207ENST00000536003 hDV102S1A0JD36 115 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 GAS8-AS1O95177 125 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
PAAF1-207ENST00000536003 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms