RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SIGMAR1Q99720 223 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 SPXQ9BT56 116 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 UBR5O95071 2799 aaPredicted RBP11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 TSSC4Q9Y5U2 329 aaPredicted RBP11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 TMEM238C9JI98 176 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 BEAN1Q3B7T3 259 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 Q6ZSN1 163 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 A4D1N5 150 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 SPANXA1Q9NS26 97 aa11.66□□□□□ -0.54
CHMP1A-202ENST00000535997 IGHV3-53P01767 116 aa11.65□□□□□ -0.54
CHMP1A-202ENST00000535997 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
CHMP1A-202ENST00000535997 SPATA25Q9BR10 227 aa11.65□□□□□ -0.54
CHMP1A-202ENST00000535997 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
CHMP1A-202ENST00000535997 Q9UF83 564 aa11.65□□□□□ -0.54
CHMP1A-202ENST00000535997 INSP01308 110 aa11.65□□□□□ -0.55
CHMP1A-202ENST00000535997 FOXI1Q12951 378 aa11.65□□□□□ -0.55
CHMP1A-202ENST00000535997 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.55
CHMP1A-202ENST00000535997 USP24Q9UPU5 2620 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 TCL1BO95988 128 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 CEMP1Q6PRD7 247 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 Q96MF0 132 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 UBE2D4Q9Y2X8 147 aa11.64□□□□□ -0.55
CHMP1A-202ENST00000535997 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 TINCRA0A1B0GVN0 87 aa11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 INSL3P51460 131 aa11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 SCGB1C2P0DMR2 95 aa11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 TMEM263Q8WUH6 116 aaKnown RBP11.63□□□□□ -0.55
CHMP1A-202ENST00000535997 RS1O15537 224 aa11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 AZU1P20160 251 aa11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 ZNF843Q8N446 348 aa11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 GTSF1LQ9H1H1 148 aa11.62□□□□□ -0.55
CHMP1A-202ENST00000535997 TRAV25A0A0B4J276 109 aa11.61□□□□□ -0.55
CHMP1A-202ENST00000535997 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
CHMP1A-202ENST00000535997 SBSPONQ8IVN8 264 aa11.61□□□□□ -0.55
CHMP1A-202ENST00000535997 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
CHMP1A-202ENST00000535997 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
CHMP1A-202ENST00000535997 TRAV8-3A0A0A6YYJ7 113 aa11.6□□□□□ -0.55
CHMP1A-202ENST00000535997 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
CHMP1A-202ENST00000535997 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
CHMP1A-202ENST00000535997 Q6ZSV7 163 aa11.6□□□□□ -0.55
CHMP1A-202ENST00000535997 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 IGKV2-29A2NJV5 120 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 TEX29Q8N6K0 151 aa11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 LITAFQ99732 161 aa11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
CHMP1A-202ENST00000535997 XCL2Q9UBD3 114 aa11.58□□□□□ -0.55
CHMP1A-202ENST00000535997 NDUFA12Q9UI09 145 aa11.58□□□□□ -0.55
CHMP1A-202ENST00000535997 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
CHMP1A-202ENST00000535997 KRTAP1-3Q8IUG1 177 aa11.58□□□□□ -0.56
CHMP1A-202ENST00000535997 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 AKAP9Q99996 3911 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 ADARB2-AS1A8MUL3 147 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 STHQ8IWL8 128 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 PRSS2P07478 247 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 SPANXDQ9BXN6 97 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 GEMIN7Q9H840 131 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 SPANXCQ9NY87 97 aa11.57□□□□□ -0.56
CHMP1A-202ENST00000535997 TIRAPP58753 221 aa11.56□□□□□ -0.56
CHMP1A-202ENST00000535997 Q6ZUT4 128 aa11.56□□□□□ -0.56
CHMP1A-202ENST00000535997 APCP25054 2843 aa11.56□□□□□ -0.56
CHMP1A-202ENST00000535997 FHL3Q13643 280 aa11.56□□□□□ -0.56
CHMP1A-202ENST00000535997 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 M0QXV9 152 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 ADAMTSL4-AS1Q5T5F5 129 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 C1orf158Q8N1D5 194 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 RNF183Q96D59 192 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 ZFAND6Q6FIF0 208 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 DGAT2L7PQ6IED9 249 aa11.55□□□□□ -0.56
CHMP1A-202ENST00000535997 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 H7C2G1 150 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 IL17DQ8TAD2 202 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 CARD19Q96LW7 228 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 WNK1Q9H4A3 2382 aa11.54□□□□□ -0.56
CHMP1A-202ENST00000535997 CCL24O00175 119 aa11.53□□□□□ -0.56
CHMP1A-202ENST00000535997 DNAJC9-AS1A6NH13 148 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms