RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 HIST2H2BDQ6DRA6 164 aa5.84□□□□□ -1.47
COL21A1-212ENST00000535941 AMN1Q8IY45 258 aa5.84□□□□□ -1.47
COL21A1-212ENST00000535941 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
COL21A1-212ENST00000535941 FASNP49327 2511 aaKnown RBP5.84□□□□□ -1.47
COL21A1-212ENST00000535941 CKS2P33552 79 aa5.84□□□□□ -1.48
COL21A1-212ENST00000535941 TWIST1Q15672 202 aa5.84□□□□□ -1.48
COL21A1-212ENST00000535941 TAL2Q16559 108 aa5.84□□□□□ -1.48
COL21A1-212ENST00000535941 DPM2O94777 84 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 GAS8-AS1O95177 125 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 SMCPP49901 116 aaPredicted RBP5.83□□□□□ -1.48
COL21A1-212ENST00000535941 ORM1P02763 201 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 FAM19A5Q7Z5A7 132 aaPredicted RBP5.83□□□□□ -1.48
COL21A1-212ENST00000535941 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
COL21A1-212ENST00000535941 SPANXA1Q9NS26 97 aa5.83□□□□□ -1.48
COL21A1-212ENST00000535941 SETXQ7Z333 2677 aaKnown RBP5.83□□□□□ -1.48
COL21A1-212ENST00000535941 TRAV4A0A0B4J268 109 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 LINC01549A6NIU2 74 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 SMKR1H3BMG3 65 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 GNRH2O43555 120 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 NPYP01303 97 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 ASIPP42127 132 aa5.82□□□□□ -1.48
COL21A1-212ENST00000535941 KLK5Q9Y337 293 aaPredicted RBP5.81□□□□□ -1.48
COL21A1-212ENST00000535941 IGHV1OR15-1A0A075B7D0 117 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 CMC4P56277 68 aaPredicted RBP5.81□□□□□ -1.48
COL21A1-212ENST00000535941 ZFP2Q6ZN57 461 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 ANKRD29Q8N6D5 301 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 C1orf43Q9BWL3 253 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 HHLA3Q9XRX5 114 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 PKIGQ9Y2B9 76 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 NIPBLQ6KC79 2804 aaeCLIP5.81□□□□□ -1.48
COL21A1-212ENST00000535941 MORN3Q6PF18 240 aaPredicted RBP5.81□□□□□ -1.48
COL21A1-212ENST00000535941 SCGB1D4Q6XE38 83 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 Q8N1Y9 231 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 MAPKAPK5-AS1Q8N8E1 139 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 RASL10AQ92737 203 aa5.81□□□□□ -1.48
COL21A1-212ENST00000535941 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 TRBV6-5A0A0K0K1A5 114 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 PLAC8L1A1L4L8 177 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 KNCNA6PVL3 124 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 DEFB131AP59861 70 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 WFDC9Q8NEX5 89 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 SPATA3Q8NHX4 192 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 CYSRT1A8MQ03 144 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 RPL11P62913 178 aaKnown RBP5.8□□□□□ -1.48
COL21A1-212ENST00000535941 TMEM158Q8WZ71 300 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
COL21A1-212ENST00000535941 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 ATP5LO75964 103 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 CRYGDP07320 174 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 C1orf158Q8N1D5 194 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 DPH3P1Q9H4G8 78 aa5.8□□□□□ -1.48
COL21A1-212ENST00000535941 SPINK13Q1W4C9 94 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 Q8N8P6 123 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 MRPL35Q9NZE8 188 aaKnown RBP5.79□□□□□ -1.48
COL21A1-212ENST00000535941 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 HRCT1Q6UXD1 115 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.79□□□□□ -1.48
COL21A1-212ENST00000535941 MDFICQ9P1T7 246 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 TENM1Q9UKZ4 2725 aa5.79□□□□□ -1.48
COL21A1-212ENST00000535941 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 DYNLRB2Q8TF09 96 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 TRGV11A0A075B6L2 103 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 C9JAW5 83 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 FN1P02751 2386 aaKnown RBP5.78□□□□□ -1.48
COL21A1-212ENST00000535941 VWFP04275 2813 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 POLR2KP53803 58 aaKnown RBP5.78□□□□□ -1.48
COL21A1-212ENST00000535941 C15orf53Q8NAA6 179 aa5.78□□□□□ -1.48
COL21A1-212ENST00000535941 HECTD1Q9ULT8 2610 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 TRBV7-3A0A075B6L6 115 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 TCL1BO95988 128 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 C10orf126Q8N4M7 172 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 NXT2Q9NPJ8 142 aaKnown RBP5.77□□□□□ -1.49
COL21A1-212ENST00000535941 TRAV8-4A0A0B4J246 113 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 SLC25A20O43772 301 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 OR13C6PQ8NH95 151 aa5.77□□□□□ -1.49
COL21A1-212ENST00000535941 SPRY2O43597 315 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
COL21A1-212ENST00000535941 SEC61GP60059 68 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 DNAJC30Q96LL9 226 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 FBN1P35555 2871 aaKnown RBP5.76□□□□□ -1.49
COL21A1-212ENST00000535941 DNAH1Q9P2D7 4330 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 M0QY20 66 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 TRBV27A0A0K0K1C4 114 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 RS1O15537 224 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 INSP01308 110 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
COL21A1-212ENST00000535941 PLNP26678 52 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms