RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.05□□□□□ -1.28
CCDC60-202ENST00000535685 TMEM250H0YL14 139 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 NDUFS6O75380 124 aaKnown RBP7.05□□□□□ -1.28
CCDC60-202ENST00000535685 CRPP02741 224 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 SUMO4Q6EEV6 95 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 AKAP14Q86UN6 197 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 PGLYRP4Q96LB8 373 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 DPH3P1Q9H4G8 78 aa7.05□□□□□ -1.28
CCDC60-202ENST00000535685 IGHV1-24A0A0C4DH33 117 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 A0A1B0GUV1 79 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
CCDC60-202ENST00000535685 NTF3P20783 257 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 RBX1P62877 108 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 BLOC1S1P78537 153 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 KRTAP26-1Q6PEX3 210 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 OCC1Q8TAD7 63 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 HERC1Q15751 4861 aa7.04□□□□□ -1.28
CCDC60-202ENST00000535685 SSTP61278 116 aa7.03□□□□□ -1.28
CCDC60-202ENST00000535685 HAMPP81172 84 aa7.03□□□□□ -1.28
CCDC60-202ENST00000535685 RPP21Q9H633 154 aaKnown RBP7.03□□□□□ -1.28
CCDC60-202ENST00000535685 K7EN84 100 aa7.02□□□□□ -1.29
CCDC60-202ENST00000535685 MGPP08493 103 aa7.02□□□□□ -1.29
CCDC60-202ENST00000535685 DGAT2L7PQ6IED9 249 aa7.02□□□□□ -1.29
CCDC60-202ENST00000535685 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
CCDC60-202ENST00000535685 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
CCDC60-202ENST00000535685 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
CCDC60-202ENST00000535685 NKX2-5P52952 324 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-202ENST00000535685 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-202ENST00000535685 GAGE6Q13070 117 aa7.01□□□□□ -1.29
CCDC60-202ENST00000535685 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
CCDC60-202ENST00000535685 C20orf203Q8NBC4 194 aa7.01□□□□□ -1.29
CCDC60-202ENST00000535685 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
CCDC60-202ENST00000535685 USP17L23D6RBM5 183 aa7□□□□□ -1.29
CCDC60-202ENST00000535685 TEX261Q6UWH6 196 aa7□□□□□ -1.29
CCDC60-202ENST00000535685 ALKAL2Q6UX46 152 aa7□□□□□ -1.29
CCDC60-202ENST00000535685 SCXQ7RTU7 201 aa7□□□□□ -1.29
CCDC60-202ENST00000535685 GTSF1Q8WW33 167 aa7□□□□□ -1.29
CCDC60-202ENST00000535685 RNASE7Q9H1E1 156 aaKnown RBP7□□□□□ -1.29
CCDC60-202ENST00000535685 A8MWL6 223 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 PRSS1P07477 247 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 REG3AQ06141 175 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 COTL1Q14019 142 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 TWIST1Q15672 202 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 LINC01620Q4KN68 170 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 C9orf163Q8N9P6 203 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 FAM210AQ96ND0 272 aa6.99□□□□□ -1.29
CCDC60-202ENST00000535685 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
CCDC60-202ENST00000535685 GATCO43716 136 aaKnown RBP6.98□□□□□ -1.29
CCDC60-202ENST00000535685 NCR2O95944 276 aa6.98□□□□□ -1.29
CCDC60-202ENST00000535685 HLA-DQA1P01909 254 aa6.98□□□□□ -1.29
CCDC60-202ENST00000535685 CIRBP-AS1Q8TBR5 109 aa6.98□□□□□ -1.29
CCDC60-202ENST00000535685 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
CCDC60-202ENST00000535685 H7C423 109 aa6.97□□□□□ -1.29
CCDC60-202ENST00000535685 KRTAP10-4P60372 401 aaPredicted RBP6.97□□□□□ -1.29
CCDC60-202ENST00000535685 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
CCDC60-202ENST00000535685 SMIM15Q7Z3B0 74 aa6.97□□□□□ -1.29
CCDC60-202ENST00000535685 DEFB104AQ8WTQ1 72 aa6.97□□□□□ -1.29
CCDC60-202ENST00000535685 GFRA4Q9GZZ7 299 aa6.97□□□□□ -1.29
CCDC60-202ENST00000535685 TRBV6-5A0A0K0K1A5 114 aa6.96□□□□□ -1.3
CCDC60-202ENST00000535685 AMTP48728 403 aa6.96□□□□□ -1.3
CCDC60-202ENST00000535685 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
CCDC60-202ENST00000535685 OSTCQ9NRP0 149 aa6.96□□□□□ -1.3
CCDC60-202ENST00000535685 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-202ENST00000535685 UBE2L6O14933 153 aa6.95□□□□□ -1.3
CCDC60-202ENST00000535685 SDIM1Q6ZPB5 146 aa6.95□□□□□ -1.3
CCDC60-202ENST00000535685 LINC01551Q86U37 167 aa6.95□□□□□ -1.3
CCDC60-202ENST00000535685 TSKUQ8WUA8 353 aa6.95□□□□□ -1.3
CCDC60-202ENST00000535685 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
CCDC60-202ENST00000535685 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
CCDC60-202ENST00000535685 SRP19P09132 144 aaKnown RBP6.94□□□□□ -1.3
CCDC60-202ENST00000535685 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
CCDC60-202ENST00000535685 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
CCDC60-202ENST00000535685 SMIM7Q9BQ49 75 aa6.94□□□□□ -1.3
CCDC60-202ENST00000535685 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
CCDC60-202ENST00000535685 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
CCDC60-202ENST00000535685 IGLV10-54A0A075B6I4 117 aa6.93□□□□□ -1.3
CCDC60-202ENST00000535685 A0A1B0GUT8 65 aa6.93□□□□□ -1.3
CCDC60-202ENST00000535685 ZNF25P17030 456 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-202ENST00000535685 BORCS7Q96B45 105 aa6.93□□□□□ -1.3
CCDC60-202ENST00000535685 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 I3L3M4 83 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 APCSP02743 223 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 ESDP10768 282 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 POLR2KP53803 58 aaKnown RBP6.92□□□□□ -1.3
CCDC60-202ENST00000535685 FAM74A3Q4VXF1 159 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
CCDC60-202ENST00000535685 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
CCDC60-202ENST00000535685 TRBV27A0A0K0K1C4 114 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 hDV102S1A0JD36 115 aa6.91□□□□□ -1.3
CCDC60-202ENST00000535685 SLPIP03973 132 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms