RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 I3L3M4 83 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 TIMM21Q9BVV7 248 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 A0A0J9YX75 114 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
HDAC4-214ENST00000535493 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
HDAC4-214ENST00000535493 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
HDAC4-214ENST00000535493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-214ENST00000535493 IGKV2-29A2NJV5 120 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-214ENST00000535493 M0R2P5 195 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 SNCGO76070 127 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 NSUN5P1Q3KNT7 163 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 GAGE2EQ4V326 116 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 CITED1Q99966 193 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 GAGE2DQ9UEU5 116 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
HDAC4-214ENST00000535493 ABCA12Q86UK0 2595 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 DUX3Q96PT4 197 aa9.84□□□□□ -0.83
HDAC4-214ENST00000535493 A6NDX4 124 aa9.84□□□□□ -0.84
HDAC4-214ENST00000535493 IGLV1-40P01703 118 aa9.84□□□□□ -0.84
HDAC4-214ENST00000535493 Q6ZSN1 163 aa9.84□□□□□ -0.84
HDAC4-214ENST00000535493 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.84
HDAC4-214ENST00000535493 LITAFQ99732 161 aa9.84□□□□□ -0.84
HDAC4-214ENST00000535493 A0A0B4J2C4 111 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 CCDC179H3BU77 68 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 TRBV7-9A0A0J9YWB2 115 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 NBL1P41271 181 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 C2orf82Q6UX34 121 aa9.83□□□□□ -0.84
HDAC4-214ENST00000535493 PKD1L2Q7Z442 2459 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 IGHV4-30-2A0A087WSY4 118 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
HDAC4-214ENST00000535493 RHOHQ15669 191 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 ODF3Q96PU9 254 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 ZNF469Q96JG9 3925 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-214ENST00000535493 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 IGHV4-59P01825 116 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 C15orf53Q8NAA6 179 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 MAPK1IP1LQ8NDC0 245 aa9.82□□□□□ -0.84
HDAC4-214ENST00000535493 H7C423 109 aa9.81□□□□□ -0.84
HDAC4-214ENST00000535493 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
HDAC4-214ENST00000535493 NRGNQ92686 78 aa9.81□□□□□ -0.84
HDAC4-214ENST00000535493 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
HDAC4-214ENST00000535493 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-214ENST00000535493 TRAV8-4A0A0B4J246 113 aa9.81□□□□□ -0.84
HDAC4-214ENST00000535493 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
HDAC4-214ENST00000535493 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
HDAC4-214ENST00000535493 GAGE5Q13069 117 aa9.8□□□□□ -0.84
HDAC4-214ENST00000535493 GAGE6Q13070 117 aa9.8□□□□□ -0.84
HDAC4-214ENST00000535493 DEFB136Q30KP8 78 aa9.8□□□□□ -0.84
HDAC4-214ENST00000535493 LRRK2Q5S007 2527 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 TRBV10-2A0A0K0K1G8 114 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 H3BMM0 161 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 UBE2WQ96B02 151 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 NAV2Q8IVL1 2488 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
HDAC4-214ENST00000535493 K7EQG2 157 aa9.78□□□□□ -0.84
HDAC4-214ENST00000535493 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.78□□□□□ -0.84
HDAC4-214ENST00000535493 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
HDAC4-214ENST00000535493 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
HDAC4-214ENST00000535493 PSMB8P28062 276 aa9.78□□□□□ -0.84
HDAC4-214ENST00000535493 H3BUA1 57 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 NDUFA7O95182 113 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 GNLYP22749 145 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.84
HDAC4-214ENST00000535493 CFHR3Q02985 330 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 LINC00467Q9BRT7 94 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 PIMREGQ9BSJ6 248 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.84
HDAC4-214ENST00000535493 K7EMT4 169 aa9.77□□□□□ -0.85
HDAC4-214ENST00000535493 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
HDAC4-214ENST00000535493 C18orf65Q6ZTR6 163 aa9.77□□□□□ -0.85
HDAC4-214ENST00000535493 VSIG2Q96IQ7 327 aa9.77□□□□□ -0.85
HDAC4-214ENST00000535493 ATP5J2P56134 94 aa9.76□□□□□ -0.85
HDAC4-214ENST00000535493 BRI3O95415 125 aa9.76□□□□□ -0.85
HDAC4-214ENST00000535493 IFITM1P13164 125 aa9.76□□□□□ -0.85
HDAC4-214ENST00000535493 DEFB131AP59861 70 aa9.76□□□□□ -0.85
HDAC4-214ENST00000535493 DEFB112Q30KQ8 113 aa9.76□□□□□ -0.85
HDAC4-214ENST00000535493 CCL19Q99731 98 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 DOPEY1Q5JWR5 2465 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 MSMBP08118 114 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 COX6A2Q02221 97 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 MIAQ16674 131 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 C10orf105Q8TEF2 133 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 CHCHD7Q9BUK0 85 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 CCDC168Q8NDH2 2452 aa9.75□□□□□ -0.85
HDAC4-214ENST00000535493 HOXD3P31249 432 aaPredicted RBP9.74□□□□□ -0.85
HDAC4-214ENST00000535493 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
HDAC4-214ENST00000535493 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
HDAC4-214ENST00000535493 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
HDAC4-214ENST00000535493 IGSF10Q6WRI0 2623 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 RBMY1BA6NDE4 496 aaKnown RBP9.73□□□□□ -0.85
HDAC4-214ENST00000535493 RBMY1EA6NEQ0 496 aaKnown RBP9.73□□□□□ -0.85
HDAC4-214ENST00000535493 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms