RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NIT2Q9NQR4 276 aa10.51□□□□□ -0.73
CLSTN3-204ENST00000535313 K7EN84 100 aa10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 PRSS1P07477 247 aa10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 CTRLP40313 264 aa10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 TWIST1Q15672 202 aa10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 PGLYRP4Q96LB8 373 aa10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 EIF5A2Q9GZV4 153 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-204ENST00000535313 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
CLSTN3-204ENST00000535313 UBE2L6O14933 153 aa10.49□□□□□ -0.73
CLSTN3-204ENST00000535313 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
CLSTN3-204ENST00000535313 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-204ENST00000535313 IGLV10-54A0A075B6I4 117 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 COTL1Q14019 142 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 CLRN3Q8NCR9 226 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 OCC1Q8TAD7 63 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
CLSTN3-204ENST00000535313 AMTP48728 403 aa10.47□□□□□ -0.73
CLSTN3-204ENST00000535313 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.73
CLSTN3-204ENST00000535313 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-204ENST00000535313 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.73
CLSTN3-204ENST00000535313 C9orf163Q8N9P6 203 aa10.46□□□□□ -0.73
CLSTN3-204ENST00000535313 CEBPGP53567 150 aa10.45□□□□□ -0.74
CLSTN3-204ENST00000535313 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
CLSTN3-204ENST00000535313 SMIM7Q9BQ49 75 aa10.45□□□□□ -0.74
CLSTN3-204ENST00000535313 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
CLSTN3-204ENST00000535313 hDV102S1A0JD36 115 aa10.44□□□□□ -0.74
CLSTN3-204ENST00000535313 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
CLSTN3-204ENST00000535313 GATCO43716 136 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 RAB14P61106 215 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 PEA15Q15121 130 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 LINC01551Q86U37 167 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 SMDT1Q9H4I9 107 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 AP5S1Q9NUS5 200 aa10.43□□□□□ -0.74
CLSTN3-204ENST00000535313 ZNF727A8MUV8 499 aa10.42□□□□□ -0.74
CLSTN3-204ENST00000535313 A8MWL6 223 aa10.42□□□□□ -0.74
CLSTN3-204ENST00000535313 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-204ENST00000535313 CNBPP62633 177 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-204ENST00000535313 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 NCR2O95944 276 aa10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 SDIM1Q6ZPB5 146 aa10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 FAM231DQ6ZW35 169 aa10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-204ENST00000535313 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
CLSTN3-204ENST00000535313 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
CLSTN3-204ENST00000535313 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-204ENST00000535313 RPL23P62829 140 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-204ENST00000535313 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
CLSTN3-204ENST00000535313 IGHV3-64A0A075B6Q5 118 aa10.39□□□□□ -0.75
CLSTN3-204ENST00000535313 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
CLSTN3-204ENST00000535313 APCSP02743 223 aa10.39□□□□□ -0.75
CLSTN3-204ENST00000535313 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
CLSTN3-204ENST00000535313 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-204ENST00000535313 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 H7C423 109 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 FAM74A3Q4VXF1 159 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 CT83Q5H943 113 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 ISOC2Q96AB3 205 aa10.38□□□□□ -0.75
CLSTN3-204ENST00000535313 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 OXTP01178 125 aa10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 TMEM241Q24JQ0 296 aa10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
CLSTN3-204ENST00000535313 PANO1I0J062 215 aa10.36□□□□□ -0.75
CLSTN3-204ENST00000535313 I3L3M4 83 aa10.36□□□□□ -0.75
CLSTN3-204ENST00000535313 PMCHP20382 165 aa10.36□□□□□ -0.75
CLSTN3-204ENST00000535313 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
CLSTN3-204ENST00000535313 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 SLPIP03973 132 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 FGF6P10767 208 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 V9GYV3 84 aa10.35□□□□□ -0.75
CLSTN3-204ENST00000535313 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 ADIRFQ15847 76 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 BTF3L4Q96K17 158 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 ST20Q9HBF5 79 aa10.34□□□□□ -0.75
CLSTN3-204ENST00000535313 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
CLSTN3-204ENST00000535313 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
CLSTN3-204ENST00000535313 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
CLSTN3-204ENST00000535313 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
CLSTN3-204ENST00000535313 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
CLSTN3-204ENST00000535313 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-204ENST00000535313 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms