RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ASIP	P42127	132 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	FHL2	Q14192	279 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	PRR9	Q5T870	116 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	CD164L2	Q6UWJ8	174 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	NEGR1	Q7Z3B1	354 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	TNFRSF18	Q9Y5U5	241 aa		7.83	□□□□□ -1.16
CTNND1-238	ENST00000534647	IGHV1OR15-1	A0A075B7D0	117 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	IGKV3D-20	A0A0C4DH25	116 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	S100A2	P29034	98 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	KRTAP10-1	P60331	282 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	TWIST1	Q15672	202 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647		Q5VSD8	79 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	FAM159A	Q6UWV7	190 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	SMIM15	Q7Z3B0	74 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	KCNS1	Q96KK3	526 aa		7.82	□□□□□ -1.16
CTNND1-238	ENST00000534647	AKR1D1	P51857	326 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	CACNG7	P62955	275 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	KIAA1644	Q3SXP7	199 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	MSRB1	Q9NZV6	116 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	C11orf21	Q9P2W6	132 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	TP53TG3	Q9ULZ0	132 aa		7.81	□□□□□ -1.16
CTNND1-238	ENST00000534647	HERC1	Q15751	4861 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	DNAH10OS	P0CZ25	163 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	SRI	P30626	198 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	MUC21	Q5SSG8	566 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	BAGE3	Q86Y29	109 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	GATD1	Q8NB37	220 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	RASL10A	Q92737	203 aa		7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	MRPL16	Q9NX20	251 aa	Known RBP	7.8	□□□□□ -1.16
CTNND1-238	ENST00000534647	SRRM2	Q9UQ35	2752 aa	Known RBP	7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	MUC21	A0A0G2JKD1	596 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	MUC21	A0A140T8X8	626 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647		H3BVH4	76 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647		K7EQD1	137 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	SNAI2	O43623	268 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	IGHV3-53	P01767	116 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	OR5AL1	P0C617	328 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	NTF3	P20783	257 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	EVI2A	P22794	236 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	FUS	P35637	526 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	OR10J3	Q5JRS4	329 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	COA6	Q5JTJ3	125 aa	Known RBP	7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	SPANXN1	Q5VSR9	72 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	CNFN	Q9BYD5	112 aa		7.79	□□□□□ -1.16
CTNND1-238	ENST00000534647	ZNF415	Q09FC8	603 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647		Q0VG73	95 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	PDZD11	Q5EBL8	140 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	DNLZ	Q5SXM8	178 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647		Q6ZQT7	251 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	ERAS	Q7Z444	233 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	HIST3H2BB	Q8N257	126 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	C10orf126	Q8N4M7	172 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	PHLDA3	Q9Y5J5	127 aa		7.78	□□□□□ -1.16
CTNND1-238	ENST00000534647	TRGV4	A0A0C4DH28	118 aa		7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	SH2D6	Q7Z4S9	175 aa		7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	WFDC10B	Q8IUB3	73 aa		7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	NTN5	Q8WTR8	489 aa	Predicted RBP	7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	ALKBH7	Q9BT30	221 aa	Predicted RBP	7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	TMEM70	Q9BUB7	260 aa		7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	TMEM191A	Q9H0A3	160 aa		7.77	□□□□□ -1.17
CTNND1-238	ENST00000534647	GNRH2	O43555	120 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	TDRG1	Q3Y452	100 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	FAM104B	Q5XKR9	115 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	OR10AG1	Q8NH19	301 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	ZNF479	Q96JC4	524 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	MDFIC	Q9P1T7	246 aa		7.76	□□□□□ -1.17
CTNND1-238	ENST00000534647	LRCOL1	A6NCL2	159 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647		M0R381	172 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	SMR3B	P02814	79 aa	Predicted RBP	7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	CRYGD	P07320	174 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	FABP4	P15090	132 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	AMN1	Q8IY45	258 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	SYT8	Q8NBV8	401 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	C18orf32	Q8TCD1	76 aa		7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	FLG2	Q5D862	2391 aa	Predicted RBP	7.75	□□□□□ -1.17
CTNND1-238	ENST00000534647	TRAV4	A0A0B4J268	109 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	SERF1A	O75920	110 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	PPBP	P02775	128 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	CKS2	P33552	79 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	IQCJ	Q1A5X6	159 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	ORMDL3	Q8N138	153 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	PRELID3A	Q96N28	172 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	AP1S3	Q96PC3	154 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	SAMD10	Q9BYL1	202 aa		7.74	□□□□□ -1.17
CTNND1-238	ENST00000534647	IGHV3-16	A0A0C4DH30	117 aa		7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	IBA57-AS1	B1ANH7	110 aa		7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	SMIM17	P0DL12	118 aa		7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	RNASE3	P12724	160 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	MRPL51	Q4U2R6	128 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	LINC01556	Q5JQF7	62 aa		7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	PACRG	Q96M98	296 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	HIST1H2BL	Q99880	126 aa		7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-238	ENST00000534647	IGLV5-52	A0A0A0MRZ9	124 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647	IGHV3-38	A0A0C4DH36	116 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647		D6R8Y8	96 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647		M0R2P5	195 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647	HSBP1	O75506	76 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647	ESD	P10768	282 aa		7.72	□□□□□ -1.17
CTNND1-238	ENST00000534647	RAB4A	P20338	218 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms