RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 K7EIL1 84 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 GNRH2O43555 120 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 INSP01308 110 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 IGLC6P0CF74 106 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 CRYBA4P53673 196 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 ATP6V0E2Q8NHE4 81 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 GTSF1Q8WW33 167 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
CMTM1-220ENST00000534143 TRAV26-1A0A087WT03 109 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 TMSB15BA0A087X1C1 80 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 TEX48A0A1B0GUV7 120 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 A0A1B0GXF2 115 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.42□□□□□ -1.7
CMTM1-220ENST00000534143 HBDP02042 147 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 PRB2P02812 416 aaPredicted RBP4.42□□□□□ -1.7
CMTM1-220ENST00000534143 RNASE3P12724 160 aaKnown RBP4.42□□□□□ -1.7
CMTM1-220ENST00000534143 NMUP48645 174 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 APOC4P55056 127 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 C2orf91Q6ZV80 131 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 LINC01587Q99440 93 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
CMTM1-220ENST00000534143 MUC4Q99102 2169 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 SNAI2O43623 268 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 ATP5LO75964 103 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 APOMO95445 188 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 PRM2P04554 102 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 FRMD6-AS1P0C7T7 363 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 GAGE5Q13069 117 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 GAGE6Q13070 117 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 TWIST1Q15672 202 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 PGLYRP4Q96LB8 373 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 C9orf85Q96MD7 179 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 C1orf43Q9BWL3 253 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
CMTM1-220ENST00000534143 IGHV4-4A0A075B6R2 117 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 A0A1B0GWB2 263 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 PLAC8L1A1L4L8 177 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 F5H697 171 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 SPRY2O43597 315 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 TRIAP1O43715 76 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 SPINK8P0C7L1 97 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 ARMS2P0C7Q2 107 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 ASIPP42127 132 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 ZFAND6Q6FIF0 208 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 C11orf72Q8NBR9 251 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 RNF183Q96D59 192 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 CHAC1Q9BUX1 264 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 CNFNQ9BYD5 112 aa4.4□□□□□ -1.71
CMTM1-220ENST00000534143 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
CMTM1-220ENST00000534143 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
CMTM1-220ENST00000534143 SMIM9A6NGZ8 99 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 H3BVH4 76 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 NXPH4O95158 308 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
CMTM1-220ENST00000534143 CACNG7P62955 275 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 DEFB135Q30KP9 77 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 ZNF493Q6ZR52 646 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 CEND1Q8N111 149 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 TMEM263Q8WUH6 116 aaKnown RBP4.39□□□□□ -1.71
CMTM1-220ENST00000534143 PTH2Q96A98 100 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 IFI27L1Q96BM0 104 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 OVOL2Q9BRP0 275 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
CMTM1-220ENST00000534143 ERG28Q9UKR5 140 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 TP53TG1Q9Y2A0 90 aa4.39□□□□□ -1.71
CMTM1-220ENST00000534143 H3BMG7 143 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 HTN1P15515 57 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 DAZ2Q13117 558 aaKnown RBP4.38□□□□□ -1.71
CMTM1-220ENST00000534143 TTC32Q5I0X7 151 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 DEFB121Q5J5C9 76 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 SBSPONQ8IVN8 264 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 PPDPFLQ8WWR9 84 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 SPXQ9BT56 116 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 MAP1LC3AQ9H492 121 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 SPANXCQ9NY87 97 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 MSRB1Q9NZV6 116 aa4.38□□□□□ -1.71
CMTM1-220ENST00000534143 NACAE9PAV3 2078 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 IGLL5B9A064 214 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 E9PLD3 99 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 M0R2P5 195 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 SNCGO76070 127 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 DPM2O94777 84 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 TSPAN13O95857 204 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 IGKCP01834 107 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms