RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 KIAA1109Q2LD37 5005 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 IGKV2D-24A0A075B6R9 120 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-219ENST00000533953 TRBV6-5A0A0K0K1A5 114 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-219ENST00000533953 PPP1R2P9O14990 202 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 FRZBQ92765 325 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 MRAP2Q96G30 205 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 PKHD1P08F94 4074 aa8.89□□□□□ -0.99
CMTM1-219ENST00000533953 LINC00862A6NCI5 91 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 HBBP68871 147 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 ELOBQ15370 118 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 LINC00269Q8N2A0 174 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 NRACQ8N912 160 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 TMEM70Q9BUB7 260 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
CMTM1-219ENST00000533953 I3L3M4 83 aa8.87□□□□□ -0.99
CMTM1-219ENST00000533953 EREGO14944 169 aa8.87□□□□□ -0.99
CMTM1-219ENST00000533953 TSHBP01222 138 aa8.87□□□□□ -0.99
CMTM1-219ENST00000533953 POLR2KP53803 58 aaKnown RBP8.87□□□□□ -0.99
CMTM1-219ENST00000533953 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
CMTM1-219ENST00000533953 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
CMTM1-219ENST00000533953 A0A1B0GW15 77 aa8.86□□□□□ -0.99
CMTM1-219ENST00000533953 CKS2P33552 79 aa8.86□□□□□ -0.99
CMTM1-219ENST00000533953 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 D6R8Y8 96 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 UBE2L6O14933 153 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 CRPP02741 224 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 APCSP02743 223 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 SEC11CQ9BY50 192 aa8.85□□□□□ -0.99
CMTM1-219ENST00000533953 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 PKIAP61925 76 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
CMTM1-219ENST00000533953 Q8N814 137 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 LRP1BQ9NZR2 4599 aa8.84□□□□□ -0.99
CMTM1-219ENST00000533953 TRBV27A0A0K0K1C4 114 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 VCYO14598 125 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 TNFRSF6BO95407 300 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 NPYP01303 97 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 S100A8P05109 93 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 FGF6P10767 208 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 ESDP10768 282 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 KRTAP10-1P60331 282 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 REG3AQ06141 175 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 Q0VG73 95 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 RNASEKQ6P5S7 137 aaKnown RBP8.83□□□□□ -1
CMTM1-219ENST00000533953 KRTAP26-1Q6PEX3 210 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 RMI2Q96E14 147 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 C1orf43Q9BWL3 253 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
CMTM1-219ENST00000533953 DNAH5Q8TE73 4624 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
CMTM1-219ENST00000533953 A0A1B0GUV1 79 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 C7orf77A4D0Y5 90 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 C10orf91Q5T1B1 145 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 AMMECR1LQ6DCA0 310 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 BTF3L4Q96K17 158 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 HERC2O95714 4834 aa8.82□□□□□ -1
CMTM1-219ENST00000533953 HLA-DQA1P01909 254 aa8.81□□□□□ -1
CMTM1-219ENST00000533953 FCER1GP30273 86 aa8.81□□□□□ -1
CMTM1-219ENST00000533953 MIAQ16674 131 aa8.81□□□□□ -1
CMTM1-219ENST00000533953 TMEM136Q6ZRR5 245 aa8.81□□□□□ -1
CMTM1-219ENST00000533953 COX11Q9Y6N1 276 aa8.81□□□□□ -1
CMTM1-219ENST00000533953 TRBV24-1A0A075B6N3 115 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 IGLV5-52A0A0A0MRZ9 124 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 LINC01620Q4KN68 170 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 PRELID3AQ96N28 172 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 CTDSP1Q9GZU7 261 aa8.8□□□□□ -1
CMTM1-219ENST00000533953 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
CMTM1-219ENST00000533953 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
CMTM1-219ENST00000533953 TCAPO15273 167 aa8.79□□□□□ -1
CMTM1-219ENST00000533953 PPP1R17O96001 155 aa8.79□□□□□ -1
CMTM1-219ENST00000533953 C20orf78Q9BR46 151 aa8.79□□□□□ -1
CMTM1-219ENST00000533953 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
CMTM1-219ENST00000533953 USP17L23D6RBM5 183 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 APOC3P02656 99 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 GCSHP23434 173 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 HAMPP81172 84 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 ORMDL3Q8N138 153 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 IMMP2LQ96T52 175 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 KIR2DL4Q99706 377 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 RYR1P21817 5038 aa8.78□□□□□ -1
CMTM1-219ENST00000533953 H7C423 109 aa8.77□□□□□ -1.01
CMTM1-219ENST00000533953 PPBPP02775 128 aa8.77□□□□□ -1.01
CMTM1-219ENST00000533953 RNASE13Q5GAN3 156 aaKnown RBP8.77□□□□□ -1.01
CMTM1-219ENST00000533953 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
CMTM1-219ENST00000533953 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
CMTM1-219ENST00000533953 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
CMTM1-219ENST00000533953 RPL39P62891 51 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms