RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 UPK3BQ9BT76 320 aa8.15□□□□□ -1.1
COMMD9-208ENST00000533643 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.1
COMMD9-208ENST00000533643 TRBV25-1A0A075B6N4 114 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 TCAPO15273 167 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 FCER1GP30273 86 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 AMTP48728 403 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 LINC00476Q8WZB0 136 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 TMEM243Q9BU79 118 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 CHCHD7Q9BUK0 85 aa8.14□□□□□ -1.11
COMMD9-208ENST00000533643 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
COMMD9-208ENST00000533643 LY6G6CO95867 125 aa8.13□□□□□ -1.11
COMMD9-208ENST00000533643 ESDP10768 282 aa8.13□□□□□ -1.11
COMMD9-208ENST00000533643 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
COMMD9-208ENST00000533643 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
COMMD9-208ENST00000533643 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 SIVA1O15304 175 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 GAGE6Q13070 117 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 Q9H8V8 135 aa8.12□□□□□ -1.11
COMMD9-208ENST00000533643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.11□□□□□ -1.11
COMMD9-208ENST00000533643 IGKV2-29A2NJV5 120 aaPredicted RBP8.11□□□□□ -1.11
COMMD9-208ENST00000533643 Q0VG73 95 aa8.11□□□□□ -1.11
COMMD9-208ENST00000533643 FA2HQ7L5A8 372 aa8.11□□□□□ -1.11
COMMD9-208ENST00000533643 NIT1Q86X76 327 aa8.11□□□□□ -1.11
COMMD9-208ENST00000533643 Q8N3U1 123 aa8.11□□□□□ -1.11
COMMD9-208ENST00000533643 TMEM262E9PQX1 116 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 K7EMI3 77 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 LAGE3Q14657 143 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.1□□□□□ -1.11
COMMD9-208ENST00000533643 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BHQ93079 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BNQ99877 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 HIST1H2BMQ99879 126 aa8.1□□□□□ -1.11
COMMD9-208ENST00000533643 LCE6AA0A183 80 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 H7C423 109 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 UBE2L6O14933 153 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 LINC00614P0C842 121 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 IGHV3-30-3P0DP02 117 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 RAB5BP61020 215 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 ORMDL2Q53FV1 153 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
COMMD9-208ENST00000533643 A0A087WX48 190 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 C1orf196B1AJZ1 125 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 FGF6P10767 208 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 PKIAP61925 76 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 RBX1P62877 108 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
COMMD9-208ENST00000533643 MPV17L2Q567V2 206 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
COMMD9-208ENST00000533643 AP5S1Q9NUS5 200 aa8.08□□□□□ -1.12
COMMD9-208ENST00000533643 LINC00310P59036 64 aa8.07□□□□□ -1.12
COMMD9-208ENST00000533643 MRPL52Q86TS9 123 aaKnown RBP8.07□□□□□ -1.12
COMMD9-208ENST00000533643 Q8N976 141 aa8.07□□□□□ -1.12
COMMD9-208ENST00000533643 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
COMMD9-208ENST00000533643 KMT2CQ8NEZ4 4911 aaKnown RBP8.06□□□□□ -1.12
COMMD9-208ENST00000533643 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 CHCHD1Q96BP2 118 aaKnown RBP8.06□□□□□ -1.12
COMMD9-208ENST00000533643 TIMM21Q9BVV7 248 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
COMMD9-208ENST00000533643 DNAH2Q9P225 4427 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 TRAV9-2A0A087WT02 112 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 A0A096LNJ9 63 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 M0R2N4 97 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 NUPR1O60356 82 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 SERF1AO75920 110 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
COMMD9-208ENST00000533643 BTF3P20290 206 aaKnown RBP8.05□□□□□ -1.12
COMMD9-208ENST00000533643 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 CYSLTR1Q9Y271 337 aa8.05□□□□□ -1.12
COMMD9-208ENST00000533643 IBA57-AS1B1ANH7 110 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 K7EP13 123 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 G0S2P27469 103 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 SMAGPQ0VAQ4 97 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 Q6ZR54 194 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 OR5A1Q8NGJ0 315 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 TMEM101Q96IK0 257 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms