RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 MAST4O15021 2626 aa14.03□□□□□ -0.16
UBXN1-215ENST00000533476 TMEM238LA0A1B0GVL6 79 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 A6NJY4 79 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 RHODO00212 210 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 PROK1P58294 105 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 SCGB2A2Q13296 93 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 BEAN1Q3B7T3 259 aa14.02□□□□□ -0.16
UBXN1-215ENST00000533476 NFE4Q86UQ8 179 aa14.02□□□□□ -0.17
UBXN1-215ENST00000533476 STHQ8IWL8 128 aa14.02□□□□□ -0.17
UBXN1-215ENST00000533476 ZNRF2Q8NHG8 242 aa14.02□□□□□ -0.17
UBXN1-215ENST00000533476 TNFRSF18Q9Y5U5 241 aa14.01□□□□□ -0.17
UBXN1-215ENST00000533476 OPRPNQ99935 248 aaPredicted RBP14□□□□□ -0.17
UBXN1-215ENST00000533476 XCL2Q9UBD3 114 aa14□□□□□ -0.17
UBXN1-215ENST00000533476 NACAE9PAV3 2078 aa13.99□□□□□ -0.17
UBXN1-215ENST00000533476 COTL1Q14019 142 aa13.99□□□□□ -0.17
UBXN1-215ENST00000533476 SCGB1D4Q6XE38 83 aa13.99□□□□□ -0.17
UBXN1-215ENST00000533476 Q6ZSN1 163 aa13.99□□□□□ -0.17
UBXN1-215ENST00000533476 MRPL16Q9NX20 251 aaKnown RBP13.99□□□□□ -0.17
UBXN1-215ENST00000533476 PYGO1Q9Y3Y4 419 aa13.99□□□□□ -0.17
UBXN1-215ENST00000533476 IGLV4-3A0A075B6K6 122 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 RS1O15537 224 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 UBE2D1P51668 147 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 TMEM170BQ5T4T1 132 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 SPANXB1Q9NS25 103 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-215ENST00000533476 IGHV3-53P01767 116 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
UBXN1-215ENST00000533476 C1orf158Q8N1D5 194 aa13.97□□□□□ -0.17
UBXN1-215ENST00000533476 IL17DQ8TAD2 202 aa13.97□□□□□ -0.17
UBXN1-215ENST00000533476 DNAJC30Q96LL9 226 aa13.97□□□□□ -0.17
UBXN1-215ENST00000533476 ZNF418Q8TF45 676 aaPredicted RBP13.96□□□□□ -0.17
UBXN1-215ENST00000533476 A0A0J9YY99 117 aa13.96□□□□□ -0.18
UBXN1-215ENST00000533476 CMC4P56277 68 aaPredicted RBP13.96□□□□□ -0.18
UBXN1-215ENST00000533476 HILS1P60008 231 aa13.96□□□□□ -0.18
UBXN1-215ENST00000533476 SRSF9Q13242 221 aaKnown RBP eCLIP13.96□□□□□ -0.18
UBXN1-215ENST00000533476 VCX2Q9H322 139 aa13.96□□□□□ -0.18
UBXN1-215ENST00000533476 AZU1P20160 251 aa13.95□□□□□ -0.18
UBXN1-215ENST00000533476 CRYBA4P53673 196 aa13.95□□□□□ -0.18
UBXN1-215ENST00000533476 TSPEAR-AS2P59090 65 aa13.95□□□□□ -0.18
UBXN1-215ENST00000533476 Q9UF83 564 aa13.94□□□□□ -0.18
UBXN1-215ENST00000533476 NDUFA7O95182 113 aa13.94□□□□□ -0.18
UBXN1-215ENST00000533476 RPL24P83731 157 aaKnown RBP13.94□□□□□ -0.18
UBXN1-215ENST00000533476 AMELXQ99217 191 aa13.94□□□□□ -0.18
UBXN1-215ENST00000533476 TEX48A0A1B0GUV7 120 aa13.93□□□□□ -0.18
UBXN1-215ENST00000533476 TMEM223A0PJW6 202 aa13.93□□□□□ -0.18
UBXN1-215ENST00000533476 SLC25A29Q8N8R3 303 aa13.93□□□□□ -0.18
UBXN1-215ENST00000533476 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
UBXN1-215ENST00000533476 HIVEP1P15822 2718 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 J3QQQ9 107 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 ZNF22P17026 224 aaPredicted RBP13.92□□□□□ -0.18
UBXN1-215ENST00000533476 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 H3BMG7 143 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 LEPROTO15243 131 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 GAGE13Q4V321 117 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 FAM110AQ9BQ89 295 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 SPANXA1Q9NS26 97 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 PGPEP1Q9NXJ5 209 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
UBXN1-215ENST00000533476 NF1P21359 2839 aa13.91□□□□□ -0.18
UBXN1-215ENST00000533476 IGHV3OR16-12A0A075B7B8 117 aa13.91□□□□□ -0.18
UBXN1-215ENST00000533476 ADARB2-AS1A8MUL3 147 aa13.91□□□□□ -0.18
UBXN1-215ENST00000533476 IGLV1-51P01701 117 aa13.91□□□□□ -0.18
UBXN1-215ENST00000533476 WFDC2Q14508 124 aa13.91□□□□□ -0.18
UBXN1-215ENST00000533476 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
UBXN1-215ENST00000533476 J3QR89 54 aa13.9□□□□□ -0.18
UBXN1-215ENST00000533476 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.18
UBXN1-215ENST00000533476 LYRM7Q5U5X0 104 aa13.9□□□□□ -0.18
UBXN1-215ENST00000533476 TMEM263Q8WUH6 116 aaKnown RBP13.9□□□□□ -0.18
UBXN1-215ENST00000533476 IGHV3-30P01768 117 aa13.89□□□□□ -0.19
UBXN1-215ENST00000533476 IGHV3-30-5P0DP03 117 aa13.89□□□□□ -0.19
UBXN1-215ENST00000533476 TRGV1A0A0A0MS02 117 aa13.88□□□□□ -0.19
UBXN1-215ENST00000533476 MRPS36P82909 103 aaKnown RBP13.88□□□□□ -0.19
UBXN1-215ENST00000533476 UBE2D4Q9Y2X8 147 aa13.88□□□□□ -0.19
UBXN1-215ENST00000533476 NDUFA11Q86Y39 141 aa13.88□□□□□ -0.19
UBXN1-215ENST00000533476 WNK1Q9H4A3 2382 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 TSPAN13O95857 204 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
UBXN1-215ENST00000533476 UBE2D3P61077 147 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 UBE2D2P62837 147 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 CEMP1Q6PRD7 247 aaPredicted RBP13.87□□□□□ -0.19
UBXN1-215ENST00000533476 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 F8P00451 2351 aa13.87□□□□□ -0.19
UBXN1-215ENST00000533476 ANK3Q12955 4377 aaKnown RBP13.87□□□□□ -0.19
UBXN1-215ENST00000533476 TEP1Q99973 2627 aaKnown RBP13.87□□□□□ -0.19
UBXN1-215ENST00000533476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
UBXN1-215ENST00000533476 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
UBXN1-215ENST00000533476 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
UBXN1-215ENST00000533476 SMR3AQ99954 134 aa13.85□□□□□ -0.19
UBXN1-215ENST00000533476 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
UBXN1-215ENST00000533476 Q6ZTI0 123 aa13.84□□□□□ -0.19
UBXN1-215ENST00000533476 CUBNO60494 3623 aa13.84□□□□□ -0.19
UBXN1-215ENST00000533476 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
UBXN1-215ENST00000533476 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
UBXN1-215ENST00000533476 TRBV10-1A0A0K0K1A3 114 aa13.83□□□□□ -0.2
UBXN1-215ENST00000533476 TINCRA0A1B0GVN0 87 aa13.83□□□□□ -0.2
UBXN1-215ENST00000533476 CFC1BP0CG36 223 aa13.83□□□□□ -0.2
UBXN1-215ENST00000533476 CFC1P0CG37 223 aa13.83□□□□□ -0.2
UBXN1-215ENST00000533476 DAZ2Q13117 558 aaKnown RBP13.83□□□□□ -0.2
UBXN1-215ENST00000533476 ETDBQ3ZM63 59 aa13.83□□□□□ -0.2
UBXN1-215ENST00000533476 APOMO95445 188 aa13.82□□□□□ -0.2
UBXN1-215ENST00000533476 RNASE13Q5GAN3 156 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms