RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ATRAIDQ6UW56 229 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 TMEM242Q9NWH2 141 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 D6R8Y8 96 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 I3L3M4 83 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 PPP1R17O96001 155 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 APOC3P02656 99 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 PMCHP20382 165 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 CKS2P33552 79 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 AMTP48728 403 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 Q8N976 141 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 Q9HAA7 133 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 KLK12Q9UKR0 248 aa8.03□□□□□ -1.12
SSBP3-214ENST00000533209 PKD1P98161 4303 aa8.02□□□□□ -1.12
SSBP3-214ENST00000533209 TRBV24-1A0A075B6N3 115 aa8.02□□□□□ -1.13
SSBP3-214ENST00000533209 TRAV9-1A0A075B6T8 112 aa8.02□□□□□ -1.13
SSBP3-214ENST00000533209 TSHBP01222 138 aa8.02□□□□□ -1.13
SSBP3-214ENST00000533209 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
SSBP3-214ENST00000533209 RBX1P62877 108 aa8.02□□□□□ -1.13
SSBP3-214ENST00000533209 ELOBQ15370 118 aa8.02□□□□□ -1.13
SSBP3-214ENST00000533209 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 NPYP01303 97 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 APCSP02743 223 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 PPBPP02775 128 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 NDUFA5Q16718 116 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
SSBP3-214ENST00000533209 A0A1B0GUV1 79 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 VCYO14598 125 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 PHOX2AO14813 284 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 SNAPINO95295 136 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 ANGP03950 147 aaKnown RBP8□□□□□ -1.13
SSBP3-214ENST00000533209 S100PP25815 95 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 RPL32P62910 135 aaKnown RBP8□□□□□ -1.13
SSBP3-214ENST00000533209 ENHOQ6UWT2 76 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 TMEM136Q6ZRR5 245 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 SVBPQ8N300 66 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 UBE2WQ96B02 151 aa8□□□□□ -1.13
SSBP3-214ENST00000533209 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
SSBP3-214ENST00000533209 IGLV4-60A0A075B6I1 120 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-214ENST00000533209 IGKV2-29A2NJV5 120 aaPredicted RBP7.99□□□□□ -1.13
SSBP3-214ENST00000533209 UBE2L6O14933 153 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 ESDP10768 282 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 Q0VG73 95 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 C20orf203Q8NBC4 194 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 PRELID3AQ96N28 172 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
SSBP3-214ENST00000533209 LINC00269Q8N2A0 174 aa7.98□□□□□ -1.13
SSBP3-214ENST00000533209 SMIM2Q9BVW6 85 aa7.98□□□□□ -1.13
SSBP3-214ENST00000533209 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
SSBP3-214ENST00000533209 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 A0A087WTM6 91 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 H7C423 109 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 PSCAO43653 123 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 CRPP02741 224 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 FCER1GP30273 86 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 MAPKAPK5-AS1Q8N8E1 139 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 RMI2Q96E14 147 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 KIR2DL4Q99706 377 aa7.97□□□□□ -1.13
SSBP3-214ENST00000533209 IGKV2D-24A0A075B6R9 120 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 PRSS47A8MTI9 375 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 HLA-DQA1P01909 254 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 FGF6P10767 208 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 CLPSL2Q6UWE3 100 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 GNB1LQ9BYB4 327 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 LAMTOR2Q9Y2Q5 125 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 COX11Q9Y6N1 276 aa7.96□□□□□ -1.14
SSBP3-214ENST00000533209 TGIF2-C20orf24A0A0A6YYL0 155 aa7.95□□□□□ -1.14
SSBP3-214ENST00000533209 REG3AQ06141 175 aa7.95□□□□□ -1.14
SSBP3-214ENST00000533209 MIAQ16674 131 aa7.95□□□□□ -1.14
SSBP3-214ENST00000533209 AMMECR1LQ6DCA0 310 aa7.95□□□□□ -1.14
SSBP3-214ENST00000533209 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
SSBP3-214ENST00000533209 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
SSBP3-214ENST00000533209 EREGO14944 169 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 TCAPO15273 167 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-214ENST00000533209 WFDC2Q14508 124 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 KIAA1644Q3SXP7 199 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 COX19Q49B96 90 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 SPATA12Q7Z6I5 190 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 C1orf43Q9BWL3 253 aa7.94□□□□□ -1.14
SSBP3-214ENST00000533209 MT-ND6P03923 174 aa7.93□□□□□ -1.14
SSBP3-214ENST00000533209 YPEL4Q96NS1 127 aa7.93□□□□□ -1.14
SSBP3-214ENST00000533209 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
SSBP3-214ENST00000533209 TRAV8-4A0A0B4J246 113 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 LOC389332A0A1B0GUA5 103 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 LECT2O14960 151 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 BAALCQ8WXS3 180 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 TMEM101Q96IK0 257 aa7.92□□□□□ -1.14
SSBP3-214ENST00000533209 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms