RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 CCL19Q99731 98 aa3.91□□□□□ -1.78
C11orf54-212ENST00000533154 MRPL20Q9BYC9 149 aaKnown RBP3.91□□□□□ -1.78
C11orf54-212ENST00000533154 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
C11orf54-212ENST00000533154 IGLV2-18A0A075B6J9 118 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 C9JAW5 83 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 H7C1H1 209 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 LGALS9O00182 355 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 UQCRQO14949 82 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 NPFFO15130 113 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 MRPL33O75394 65 aaKnown RBP3.9□□□□□ -1.79
C11orf54-212ENST00000533154 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 SAA2P0DJI9 122 aaPredicted RBP3.9□□□□□ -1.79
C11orf54-212ENST00000533154 HLA-DMBP28068 263 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 DEFB121Q5J5C9 76 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 UTF1Q5T230 341 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 C9orf153Q5TBE3 101 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 TEX36Q5VZQ5 186 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 GOLT1AQ6ZVE7 132 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
C11orf54-212ENST00000533154 LYPD1Q8N2G4 141 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 C3orf22Q8N5N4 141 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 CNEP1R1Q8N9A8 125 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 MRAPQ8TCY5 172 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 LINC00526Q96FQ7 95 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 RNF185Q96GF1 192 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 PRADC1Q9BSG0 188 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 CNFNQ9BYD5 112 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 NDUFA4L2Q9NRX3 87 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 HIGD1AQ9Y241 93 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 CADP27708 2225 aa3.9□□□□□ -1.79
C11orf54-212ENST00000533154 TMSB15BA0A087X1C1 80 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 TRAV8-1A0A0A6YYK1 113 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 H3BMM0 161 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 H3BVH4 76 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 CECR9P0C854 216 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 SLC25A16P16260 332 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 RPL7P18124 248 aaKnown RBP3.89□□□□□ -1.79
C11orf54-212ENST00000533154 ORM2P19652 201 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 GLRXP35754 106 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 CRIP1P50238 77 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 EBI3Q14213 229 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 Q6ZTC4 211 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 UBE2WQ96B02 151 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 FLYWCH2Q96CP2 140 aaKnown RBP3.89□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.89□□□□□ -1.79
C11orf54-212ENST00000533154 CUBNO60494 3623 aa3.89□□□□□ -1.79
C11orf54-212ENST00000533154 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 ZNF815PA8K554 130 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 SMKR1H3BMG3 65 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 H3BT86 120 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 SH2D1AO60880 128 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 SAA1P0DJI8 122 aaPredicted RBP3.88□□□□□ -1.79
C11orf54-212ENST00000533154 CGB3P0DN86 165 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 CGB7P0DN87 165 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 IGHV1-2P23083 117 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 MT3P25713 68 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 HERVK_113P63121 156 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 PLGLAQ15195 96 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 ATXN8Q156A1 80 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 REG3GQ6UW15 175 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 Q8N377 158 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 CD177Q8N6Q3 437 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM167AQ8TBQ9 72 aa3.88□□□□□ -1.79
C11orf54-212ENST00000533154 ANK3Q12955 4377 aaKnown RBP3.88□□□□□ -1.79
C11orf54-212ENST00000533154 TRBV19A0A075B6N1 114 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 A0A0J9YY99 117 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 LOC107984640A0A0U1RRK4 108 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 F5H768 121 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 NDUFA3O95167 84 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 IGHV3-13P01766 116 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 ACYP1P07311 99 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 CRYGAP11844 174 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
C11orf54-212ENST00000533154 KIR2DL5BQ8NHK3 375 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 PLEKHB2Q96CS7 222 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 MRPL36Q9P0J6 103 aaKnown RBP3.87□□□□□ -1.79
C11orf54-212ENST00000533154 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
C11orf54-212ENST00000533154 PLCE1Q9P212 2302 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 A0A087WYN8 130 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 A0A096LNT2 108 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 FAM236AA0A1B0GUQ0 79 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 FAM236BA0A1B0GV22 79 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 H3BRN7 92 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 MRPS12O15235 138 aaKnown RBP3.86□□□□□ -1.79
C11orf54-212ENST00000533154 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 CRYGDP07320 174 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 COX7CP15954 63 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 CXCL5P42830 114 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 EFNA4P52798 201 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 EMP1P54849 157 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms