RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 COL4A3Q01955 1670 aa8.09□□□□□ -1.11
COLCA1-203ENST00000532918 FXYD2P54710 66 aa8.09□□□□□ -1.11
COLCA1-203ENST00000532918 ANKHD1Q8IWZ3 2542 aaKnown RBP8.09□□□□□ -1.11
COLCA1-203ENST00000532918 DENND4AQ7Z401 1863 aa8.09□□□□□ -1.11
COLCA1-203ENST00000532918 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
COLCA1-203ENST00000532918 IGHV4-4A0A075B6R2 117 aa8.09□□□□□ -1.11
COLCA1-203ENST00000532918 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 Q6ZTI0 123 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 FAM110AQ9BQ89 295 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 DYSFO75923 2080 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 PDE6GP18545 87 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 REG3AQ06141 175 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 PRR15LQ9BU68 103 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
COLCA1-203ENST00000532918 LINC00482Q8N8I6 264 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 DIRC1Q969H9 104 aa8.08□□□□□ -1.12
COLCA1-203ENST00000532918 ASPHD1Q5U4P2 390 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 P0DMU3 169 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 KMT2EQ8IZD2 1858 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 M0QXV9 152 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 MT-ATP8P03928 68 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 UPK3BQ9BT76 320 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 DEFB1P60022 68 aa8.07□□□□□ -1.12
COLCA1-203ENST00000532918 IGKV2-24A0A0C4DH68 120 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 PIEZO1Q92508 2521 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 KIAA1549LQ6ZVL6 1849 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 A6NED7 52 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
COLCA1-203ENST00000532918 ATRXP46100 2492 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 LECT2O14960 151 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 IGHV1-58A0A0C4DH39 117 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 TRBV6-4A0A1B0GX49 114 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 NCR3O14931 201 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 LY6G6CO95867 125 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 TDRG1Q3Y452 100 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 LINC00269Q8N2A0 174 aa8.05□□□□□ -1.12
COLCA1-203ENST00000532918 P0C879 139 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 ZFAND2AQ8N6M9 145 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 C10orf142B7Z368 130 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 RPL39P62891 51 aaKnown RBP8.04□□□□□ -1.12
COLCA1-203ENST00000532918 HIST2H2BDQ6DRA6 164 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 DSCAMO60469 2012 aa8.04□□□□□ -1.12
COLCA1-203ENST00000532918 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 Q8N6K4 173 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 CACNA1AO00555 2505 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 TIMM17BO60830 172 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 NDUFC1O43677 76 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 CASC2Q6XLA1 102 aa8.03□□□□□ -1.12
COLCA1-203ENST00000532918 CHCHD10Q8WYQ3 142 aaPredicted RBP8.02□□□□□ -1.12
COLCA1-203ENST00000532918 PTPN13Q12923 2485 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 LINC00322Q6ZN03 302 aaPredicted RBP8.02□□□□□ -1.13
COLCA1-203ENST00000532918 ZFAND3Q9H8U3 227 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 BPY2O14599 106 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 IGLV1-40P01703 118 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 MIAQ16674 131 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 DOCK11Q5JSL3 2073 aa8.02□□□□□ -1.13
COLCA1-203ENST00000532918 A0A087WZ39 114 aa8.01□□□□□ -1.13
COLCA1-203ENST00000532918 COX7BP24311 80 aa8.01□□□□□ -1.13
COLCA1-203ENST00000532918 SPG11Q96JI7 2443 aa8.01□□□□□ -1.13
COLCA1-203ENST00000532918 C10orf99Q6UWK7 81 aa8.01□□□□□ -1.13
COLCA1-203ENST00000532918 NUPR1O60356 82 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 KRTAP10-9P60411 292 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 LINC00173Q6ZV60 143 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 TP53TG3Q9ULZ0 132 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 C16orf95Q9H693 158 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 ZNF106Q9H2Y7 1883 aaKnown RBP8□□□□□ -1.13
COLCA1-203ENST00000532918 C19orf71A6NCJ1 209 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 H0Y9J4 135 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
COLCA1-203ENST00000532918 KPRPQ5T749 579 aaPredicted RBP8□□□□□ -1.13
COLCA1-203ENST00000532918 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
COLCA1-203ENST00000532918 CEP192Q8TEP8 1941 aa7.99□□□□□ -1.13
COLCA1-203ENST00000532918 SMR3AQ99954 134 aa7.99□□□□□ -1.13
COLCA1-203ENST00000532918 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
COLCA1-203ENST00000532918 E9PLD3 99 aa7.99□□□□□ -1.13
COLCA1-203ENST00000532918 CHD3Q12873 2000 aaKnown RBP7.98□□□□□ -1.13
COLCA1-203ENST00000532918 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 UBE2D1P51668 147 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 CDSNQ15517 529 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms