RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 Q8N6K4 173 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 RABAC1Q9UI14 185 aa1.78□□□□□ -2.12
AC055878.1-201ENST00000531858 PCNX2A6NKB5 2137 aa1.78□□□□□ -2.13
AC055878.1-201ENST00000531858 PTPRDP23468 1912 aa1.78□□□□□ -2.13
AC055878.1-201ENST00000531858 RREB1Q92766 1687 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 SHANK2Q9UPX8 1470 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 UACAQ9BZF9 1416 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 CHKB-CPT1BH3BT56 60 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 K7EP34 96 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 CCL18P55774 89 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 SPAG11BQ08648 103 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 SPAG11AQ6PDA7 123 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 VMO1Q7Z5L0 202 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 KRTAP13-1Q8IUC0 172 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 WFDC6Q9BQY6 131 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 GBF1Q92538 1859 aa1.77□□□□□ -2.13
AC055878.1-201ENST00000531858 FANCAO15360 1455 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 MLH3Q9UHC1 1453 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 CEP162Q5TB80 1403 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 TMEM14DPA8MWL7 114 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 HMGN4O00479 90 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 BCE1O60756 84 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 SPINK13Q1W4C9 94 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 NRXN2Q9P2S2 1712 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 HEATR1Q9H583 2144 aaKnown RBP1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 MYOFQ9NZM1 2061 aa1.76□□□□□ -2.13
AC055878.1-201ENST00000531858 PLIN4Q96Q06 1357 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 COL4A1P02462 1669 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 SYS1-DBNDD2H3BUS1 97 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 H7BZZ5 65 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 FAUP35544 74 aaKnown RBP1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 KRTAP21-3Q3LHN1 58 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 TMEM170BQ5T4T1 132 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 BAGE3Q86Y29 109 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 PRO1933Q9H354 126 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 UNC13CQ8NB66 2214 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 ARFGEF3Q5TH69 2177 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 MRC1P22897 1456 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 IQSEC2Q5JU85 1478 aa1.75□□□□□ -2.13
AC055878.1-201ENST00000531858 ABCA3Q99758 1704 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 FREM1Q5H8C1 2179 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 A0A096LNT2 108 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 A0A1W2PPM0 123 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 TRAPPC2P0DI81 140 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 TRAPPC2BP0DI82 140 aa1.74□□□□□ -2.13
AC055878.1-201ENST00000531858 UNC13BO14795 1591 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 SPAG17Q6Q759 2223 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 UQCRHLA0A096LP55 91 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 APOC3P02656 99 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 SAA2P0DJI9 122 aaPredicted RBP1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 MAGI2Q86UL8 1455 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 MYOM1P52179 1685 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 PATJQ8NI35 1801 aa1.73□□□□□ -2.13
AC055878.1-201ENST00000531858 TNRC6AQ8NDV7 1962 aaKnown RBP1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 EHBP1L1Q8N3D4 1523 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 PEAK1Q9H792 1746 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 KDM5AP29375 1690 aaKnown RBP1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 ATP10BO94823 1461 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 UQCR11O14957 56 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 Q96NJ1 140 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 C20orf78Q9BR46 151 aa1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 RRBP1Q9P2E9 1410 aaKnown RBP1.72□□□□□ -2.13
AC055878.1-201ENST00000531858 CHD1O14646 1710 aa1.71□□□□□ -2.13
AC055878.1-201ENST00000531858 E9PCH4 1651 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 TRBV25-1A0A075B6N4 114 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 F8VRH5 84 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 CYB5AP00167 134 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 PMCHL1Q16048 86 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 S100A16Q96FQ6 103 aaKnown RBP1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 NINQ8N4C6 2090 aa1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 MYO18AQ92614 2054 aaKnown RBP1.71□□□□□ -2.14
AC055878.1-201ENST00000531858 BAHCC1Q9P281 2608 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 IGLC7A0M8Q6 106 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 M0R135 149 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 CITO14578 2027 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 UQCRHP07919 91 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 COX17Q14061 63 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 PEA15Q15121 130 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 SMIM4Q8WVI0 70 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 S100A13Q99584 98 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 NXT2Q9NPJ8 142 aaKnown RBP1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 COL5A1P20908 1838 aaPredicted RBP1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 TET3O43151 1660 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 HMGXB3Q12766 1538 aa1.7□□□□□ -2.14
AC055878.1-201ENST00000531858 EXPH5Q8NEV8 1989 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 A0A0G2JND7 137 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 SMIM11AP58511 58 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 BAGE2Q86Y30 109 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 BPESC1Q9GZL8 116 aa1.69□□□□□ -2.14
AC055878.1-201ENST00000531858 PHIPQ8WWQ0 1821 aa1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 ABCC2Q92887 1545 aa1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 TRGV1A0A0A0MS02 117 aa1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 ANGP03950 147 aaKnown RBP1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 NMBP08949 121 aa1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 TET1Q8NFU7 2136 aa1.68□□□□□ -2.14
AC055878.1-201ENST00000531858 F2Z2F3 143 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms