RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 NINQ8N4C6 2090 aa1.39□□□□□ -2.19
USP47-211ENST00000531513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
USP47-211ENST00000531513 CRYM-AS1A6NIL9 109 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 ATOX1O00244 68 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 GYPAP02724 150 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 SEC11AP67812 179 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 PMCHL2Q9BQD1 86 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 RREB1Q92766 1687 aa1.38□□□□□ -2.19
USP47-211ENST00000531513 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
USP47-211ENST00000531513 ARAP2Q8WZ64 1704 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 hADV29S1A0JD25 119 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 PPP1R17O96001 155 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 COX6CP09669 75 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 SPINK13Q1W4C9 94 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 C9orf62Q8N4C0 152 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 PRO1854Q9UHT4 67 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 BAZ1AQ9NRL2 1556 aaPredicted RBP1.37□□□□□ -2.19
USP47-211ENST00000531513 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
USP47-211ENST00000531513 PRDM15P57071 1507 aaPredicted RBP1.36□□□□□ -2.19
USP47-211ENST00000531513 SFT2D2O95562 160 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 IGLC1P0CG04 106 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 SPAG11BQ08648 103 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 SPAG11AQ6PDA7 123 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 TSLPQ969D9 159 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 AMELXQ99217 191 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 MANBALQ9NQG1 85 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 NRXN2Q9P2S2 1712 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 V9GYH0 126 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 GOLGA3Q08378 1498 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 ZGRF1Q86YA3 2104 aa1.36□□□□□ -2.19
USP47-211ENST00000531513 ANKRD36BQ8N2N9 1353 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 NCOA6Q14686 2063 aaPredicted RBP1.35□□□□□ -2.19
USP47-211ENST00000531513 AKAP12Q02952 1782 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 A0A087WTM6 91 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 CHKB-CPT1BH3BT56 60 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 UBE2D3P61077 147 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 UBE2D2P62837 147 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 BAGE3Q86Y29 109 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 FAM213BQ8TBF2 198 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 TRGV9Q99603 122 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 WFDC6Q9BQY6 131 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 NDUFA4L2Q9NRX3 87 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 FAIMQ9NVQ4 179 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 CC2D2AQ9P2K1 1620 aa1.35□□□□□ -2.19
USP47-211ENST00000531513 SHROOM2Q13796 1616 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 TRBV7-7A0A0K0K1E9 115 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 CCL18P55774 89 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 PYY3Q5JQD4 70 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 TMEM170BQ5T4T1 132 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 SERP2Q8N6R1 65 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 CDC42SE2Q9NRR3 84 aa1.34□□□□□ -2.19
USP47-211ENST00000531513 ANKRD26Q9UPS8 1709 aa1.34□□□□□ -2.2
USP47-211ENST00000531513 HELZ2Q9BYK8 2649 aaKnown RBP1.34□□□□□ -2.2
USP47-211ENST00000531513 SPAG17Q6Q759 2223 aa1.34□□□□□ -2.2
USP47-211ENST00000531513 CITO14578 2027 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 TOPAZ1Q8N9V7 1692 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 TRAV22A0A0B4J277 110 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 TRAPPC2P0DI81 140 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 TRAPPC2BP0DI82 140 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 FXYD6P3P58550 94 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 Q5VV11 94 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 Q8N6K4 173 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 PATJQ8NI35 1801 aa1.33□□□□□ -2.2
USP47-211ENST00000531513 A0A096LNT2 108 aa1.32□□□□□ -2.2
USP47-211ENST00000531513 HMGN4O00479 90 aa1.32□□□□□ -2.2
USP47-211ENST00000531513 LCN9Q8WX39 176 aa1.32□□□□□ -2.2
USP47-211ENST00000531513 NPVFQ9HCQ7 196 aa1.32□□□□□ -2.2
USP47-211ENST00000531513 CACFD1Q9UGQ2 172 aa1.32□□□□□ -2.2
USP47-211ENST00000531513 MRC1P22897 1456 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 CCDC18Q5T9S5 1454 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 ABCC3O15438 1527 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 LAMC3Q9Y6N6 1575 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 TMEM14DPA8MWL7 114 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 F2Z2F3 143 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 F8VRH5 84 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 UQCR11O14957 56 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 APOC3P02656 99 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 FAUP35544 74 aaKnown RBP1.31□□□□□ -2.2
USP47-211ENST00000531513 SMIM4Q8WVI0 70 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 Q96NJ1 140 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 ABCA3Q99758 1704 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 PHIPQ8WWQ0 1821 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 MED14O60244 1454 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 PLEKHH2Q8IVE3 1493 aa1.31□□□□□ -2.2
USP47-211ENST00000531513 UQCRHLA0A096LP55 91 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 M0R135 149 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 ACYP2P14621 99 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 VMO1Q7Z5L0 202 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 BAGE2Q86Y30 109 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 ROS1P08922 2347 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 MLH3Q9UHC1 1453 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 SNRNP200O75643 2136 aaKnown RBP1.3□□□□□ -2.2
USP47-211ENST00000531513 DIP2CQ9Y2E4 1556 aa1.3□□□□□ -2.2
USP47-211ENST00000531513 CNTRLQ7Z7A1 2325 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 MARF1Q9Y4F3 1742 aaKnown RBP1.29□□□□□ -2.2
USP47-211ENST00000531513 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
USP47-211ENST00000531513 MYH8P13535 1937 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms