RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 SSTP61278 116 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 SVBPQ8N300 66 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
CTSB-221ENST00000531502 PHOX2AO14813 284 aa9.08□□□□□ -0.96
CTSB-221ENST00000531502 AP1S3Q96PC3 154 aa9.08□□□□□ -0.96
CTSB-221ENST00000531502 EIF5A2Q9GZV4 153 aaKnown RBP9.08□□□□□ -0.96
CTSB-221ENST00000531502 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.07□□□□□ -0.96
CTSB-221ENST00000531502 SMIM17P0DL12 118 aa9.07□□□□□ -0.96
CTSB-221ENST00000531502 MBD3L1Q8WWY6 194 aa9.07□□□□□ -0.96
CTSB-221ENST00000531502 CARHSP1Q9Y2V2 147 aaKnown RBP9.07□□□□□ -0.96
CTSB-221ENST00000531502 SNAPINO95295 136 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 GZMBP10144 247 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
CTSB-221ENST00000531502 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 SCO1O75880 301 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 SRSF3P84103 164 aaKnown RBP9.05□□□□□ -0.96
CTSB-221ENST00000531502 ODF1Q14990 250 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 TMEM243Q9BU79 118 aa9.05□□□□□ -0.96
CTSB-221ENST00000531502 H7C1H1 209 aa9.04□□□□□ -0.96
CTSB-221ENST00000531502 IFNA1P01562 189 aa9.04□□□□□ -0.96
CTSB-221ENST00000531502 MGPP08493 103 aa9.04□□□□□ -0.96
CTSB-221ENST00000531502 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
CTSB-221ENST00000531502 A0A1B0GV50 99 aa9.03□□□□□ -0.96
CTSB-221ENST00000531502 COX6A2Q02221 97 aa9.03□□□□□ -0.96
CTSB-221ENST00000531502 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
CTSB-221ENST00000531502 TAGLN2P37802 199 aaKnown RBP9.02□□□□□ -0.97
CTSB-221ENST00000531502 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
CTSB-221ENST00000531502 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
CTSB-221ENST00000531502 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
CTSB-221ENST00000531502 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
CTSB-221ENST00000531502 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
CTSB-221ENST00000531502 ADCYAP1P18509 176 aa9.01□□□□□ -0.97
CTSB-221ENST00000531502 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
CTSB-221ENST00000531502 TMA7Q9Y2S6 64 aaKnown RBP9.01□□□□□ -0.97
CTSB-221ENST00000531502 C19orf71A6NCJ1 209 aa9□□□□□ -0.97
CTSB-221ENST00000531502 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
CTSB-221ENST00000531502 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
CTSB-221ENST00000531502 RPS10P46783 165 aaKnown RBP9□□□□□ -0.97
CTSB-221ENST00000531502 KRTAP10-8P60410 259 aa9□□□□□ -0.97
CTSB-221ENST00000531502 CACNG7P62955 275 aa9□□□□□ -0.97
CTSB-221ENST00000531502 MAJINQ3KP22 176 aa9□□□□□ -0.97
CTSB-221ENST00000531502 C11orf52Q96A22 123 aa9□□□□□ -0.97
CTSB-221ENST00000531502 TPPP3Q9BW30 176 aa9□□□□□ -0.97
CTSB-221ENST00000531502 A0A0J9YXV3 536 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 CCL20P78556 96 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 WDR73Q6P4I2 378 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 OR2D3Q8NGH3 330 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 GTSF1Q8WW33 167 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 DPH3P1Q9H4G8 78 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 GNG13Q9P2W3 67 aa8.99□□□□□ -0.97
CTSB-221ENST00000531502 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 C9JQL5 133 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 UBE2L6O14933 153 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 BCL2P10415 239 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 AMTP48728 403 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 RPS20P60866 119 aaKnown RBP8.98□□□□□ -0.97
CTSB-221ENST00000531502 STPG4Q8N801 248 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 MANBALQ9NQG1 85 aa8.98□□□□□ -0.97
CTSB-221ENST00000531502 A0A096LNI7 61 aa8.97□□□□□ -0.97
CTSB-221ENST00000531502 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
CTSB-221ENST00000531502 F2Z2F3 143 aa8.97□□□□□ -0.97
CTSB-221ENST00000531502 SRP19P09132 144 aaKnown RBP8.97□□□□□ -0.97
CTSB-221ENST00000531502 COTL1Q14019 142 aa8.97□□□□□ -0.97
CTSB-221ENST00000531502 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
CTSB-221ENST00000531502 LYZL1Q6UWQ5 148 aa8.97□□□□□ -0.97
CTSB-221ENST00000531502 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
CTSB-221ENST00000531502 TRGC1P0CF51 173 aa8.96□□□□□ -0.98
CTSB-221ENST00000531502 NTF3P20783 257 aa8.96□□□□□ -0.98
CTSB-221ENST00000531502 RHEBQ15382 184 aa8.96□□□□□ -0.98
CTSB-221ENST00000531502 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
CTSB-221ENST00000531502 SMCO4Q9NRQ5 59 aa8.96□□□□□ -0.98
CTSB-221ENST00000531502 CEBPGP53567 150 aa8.95□□□□□ -0.98
CTSB-221ENST00000531502 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTSB-221ENST00000531502 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
CTSB-221ENST00000531502 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
CTSB-221ENST00000531502 FOXI1Q12951 378 aa8.94□□□□□ -0.98
CTSB-221ENST00000531502 FAM74A3Q4VXF1 159 aa8.94□□□□□ -0.98
CTSB-221ENST00000531502 GATD1Q8NB37 220 aa8.94□□□□□ -0.98
CTSB-221ENST00000531502 SMIM12Q96EX1 92 aa8.94□□□□□ -0.98
CTSB-221ENST00000531502 TRBV20OR9-2A0A075B6H5 130 aa8.93□□□□□ -0.98
CTSB-221ENST00000531502 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
CTSB-221ENST00000531502 CTRLP40313 264 aa8.93□□□□□ -0.98
CTSB-221ENST00000531502 MEF2BQ02080 365 aaPredicted RBP8.93□□□□□ -0.98
CTSB-221ENST00000531502 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
CTSB-221ENST00000531502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.92□□□□□ -0.98
CTSB-221ENST00000531502 TRAV26-2A0A0B4J265 109 aa8.92□□□□□ -0.98
CTSB-221ENST00000531502 IGKV2-29A2NJV5 120 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms