RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 C20orf78Q9BR46 151 aa3.37□□□□□ -1.87
SSBP3-213ENST00000530618 MRPL18Q9H0U6 180 aaKnown RBP3.37□□□□□ -1.87
SSBP3-213ENST00000530618 NXT2Q9NPJ8 142 aaKnown RBP3.37□□□□□ -1.87
SSBP3-213ENST00000530618 TGIF2-C20orf24A0A0A6YYL0 155 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 D6R8Y8 96 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 I3L3M4 83 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 K7EP13 123 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 VCYO14598 125 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 RAB4AP20338 218 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 SUMO2P61956 95 aaKnown RBP3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GAGE1Q13065 139 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GAGE4Q13068 117 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GAGE5Q13069 117 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 FHL2Q14192 279 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GAGE13Q4V321 117 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 FA2HQ7L5A8 372 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 POM121L12Q8N7R1 296 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 ZNRF2Q8NHG8 242 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 PRSS3P2Q8NHM4 247 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 SAMD10Q9BYL1 202 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 GTSF1LQ9H1H1 148 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 MSRB1Q9NZV6 116 aa3.36□□□□□ -1.87
SSBP3-213ENST00000530618 TMA7Q9Y2S6 64 aaKnown RBP3.36□□□□□ -1.87
SSBP3-213ENST00000530618 A0A087WX48 190 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 IGHV1-24A0A0C4DH33 117 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 TRBV6-5A0A0K0K1A5 114 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 SDHAF1A6NFY7 115 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 C1orf196B1AJZ1 125 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 M0QY20 66 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 HOXA5P20719 270 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 AMTP48728 403 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 TIRAPP58753 221 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 RPL32P62910 135 aaKnown RBP3.35□□□□□ -1.87
SSBP3-213ENST00000530618 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
SSBP3-213ENST00000530618 ORMDL2Q53FV1 153 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 TTC32Q5I0X7 151 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 PAPPA-AS1Q5QFB9 102 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 LELP1Q5T871 98 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 AMMECR1LQ6DCA0 310 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 UFSP1Q6NVU6 142 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 C10orf126Q8N4M7 172 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 TMEM101Q96IK0 257 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 CHCHD7Q9BUK0 85 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 JPT2Q9H910 190 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
SSBP3-213ENST00000530618 TRAV26-2A0A0B4J265 109 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 A0A1B0GVY2 172 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 H7C423 109 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 TNFRSF6BO95407 300 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 LY6G6CO95867 125 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 S100A6P06703 90 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 BTF3P20290 206 aaKnown RBP3.34□□□□□ -1.87
SSBP3-213ENST00000530618 UBE2D3P61077 147 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 UBE2D2P62837 147 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 DGAT2L7PQ6IED9 249 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 ATRAIDQ6UW56 229 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 Q6ZN92 141 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 ZNF575Q86XF7 245 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 BAGE3Q86Y29 109 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 NEXN-AS1Q8NBZ9 246 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 RNF185Q96GF1 192 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 AP5S1Q9NUS5 200 aa3.34□□□□□ -1.87
SSBP3-213ENST00000530618 A0A096LPF7 62 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 TRBV6-8A0A0A6YYG3 113 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 TMEM262E9PQX1 116 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 CRPP02741 224 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 ZNF25P17030 456 aaPredicted RBP3.33□□□□□ -1.88
SSBP3-213ENST00000530618 LGALS9CQ6DKI2 356 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 Q8N8P6 123 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 CHCHD1Q96BP2 118 aaKnown RBP3.33□□□□□ -1.88
SSBP3-213ENST00000530618 RMI2Q96E14 147 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 TMEM70Q9BUB7 260 aa3.33□□□□□ -1.88
SSBP3-213ENST00000530618 MRPS16Q9Y3D3 137 aaKnown RBP3.33□□□□□ -1.88
SSBP3-213ENST00000530618 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 LOC389332A0A1B0GUA5 103 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 COLCA2A8K830 154 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 PRSS47A8MTI9 375 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 SMKR1H3BMG3 65 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 SIVA1O15304 175 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 HSBP1O75506 76 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 SCO1O75880 301 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 NPYP01303 97 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 TRGC2P03986 189 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 NPSP0C0P6 89 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 LINC00614P0C842 121 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
SSBP3-213ENST00000530618 LINC00315P59091 139 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 Q0VG73 95 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 LAGE3Q14657 143 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 IQCJQ1A5X6 159 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
SSBP3-213ENST00000530618 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms