RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 SMAGPQ0VAQ4 97 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 RAX2Q96IS3 184 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 LINC01587Q99440 93 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 INSP01308 110 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 PRM2P04554 102 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 IFITM1P13164 125 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 DEFB136Q30KP8 78 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 DEFB113Q30KQ7 82 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 ZFAND6Q6FIF0 208 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 CEMP1Q6PRD7 247 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-208ENST00000528865 SFTA2Q6UW10 78 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 MAPK1IP1LQ8NDC0 245 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 ZNF418Q8TF45 676 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-208ENST00000528865 YAE1D1Q9NRH1 226 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 Q9UF83 564 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 PRRC2AP48634 2157 aaKnown RBP6.05□□□□□ -1.44
CSTF3-208ENST00000528865 LRBAP50851 2863 aa6.05□□□□□ -1.44
CSTF3-208ENST00000528865 IGHV3-64A0A075B6Q5 118 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 SLC25A20O43772 301 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 HTN1P15515 57 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 ATXN8Q156A1 80 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 MIAQ16674 131 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 DYNLRB2Q8TF09 96 aa6.04□□□□□ -1.44
CSTF3-208ENST00000528865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-208ENST00000528865 IGKV2-29A2NJV5 120 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-208ENST00000528865 TMEM262E9PQX1 116 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 KRTAP10-9P60411 292 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 FHL3Q13643 280 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 LINC01620Q4KN68 170 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 Q6ZUT4 128 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 C1orf158Q8N1D5 194 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 CSDC2Q9Y534 153 aaKnown RBP6.03□□□□□ -1.44
CSTF3-208ENST00000528865 SORL1Q92673 2214 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 NACAE9PAV3 2078 aa6.03□□□□□ -1.44
CSTF3-208ENST00000528865 DOPEY1Q5JWR5 2465 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 IGLV5-39A0A0G2JS06 123 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 TRBV10-1A0A0K0K1A3 114 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 TRBV10-2A0A0K0K1G8 114 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 NDUFA1O15239 70 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 CIDEAO60543 219 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
CSTF3-208ENST00000528865 CMC4P56277 68 aaPredicted RBP6.02□□□□□ -1.45
CSTF3-208ENST00000528865 ODF3L2Q3SX64 289 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 Q6ZSV7 163 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 TEX29Q8N6K0 151 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 GEMIN7Q9H840 131 aaKnown RBP6.02□□□□□ -1.45
CSTF3-208ENST00000528865 TACC2O95359 2948 aa6.02□□□□□ -1.45
CSTF3-208ENST00000528865 CR1P17927 2039 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 ADARB2-AS1A8MUL3 147 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 C9JAW5 83 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 TRIAP1O43715 76 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 HERVK_113P63121 156 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 RNASE13Q5GAN3 156 aaKnown RBP6.01□□□□□ -1.45
CSTF3-208ENST00000528865 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
CSTF3-208ENST00000528865 SPG11Q96JI7 2443 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 IGHV3OR16-12A0A075B7B8 117 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 IGHV3-38A0A0C4DH36 116 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 MT-ATP8P03928 68 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 PRSS2P07478 247 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 XGP55808 180 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 COX6A2Q02221 97 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 DAZ2Q13117 558 aaKnown RBP6□□□□□ -1.45
CSTF3-208ENST00000528865 DEFB121Q5J5C9 76 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
CSTF3-208ENST00000528865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6□□□□□ -1.45
CSTF3-208ENST00000528865 Q96MF0 132 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
CSTF3-208ENST00000528865 ICOSQ9Y6W8 199 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 NCOR2Q9Y618 2525 aa6□□□□□ -1.45
CSTF3-208ENST00000528865 TRAV4A0A0B4J268 109 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 A0A1B0GV72 72 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 A8MZ25 164 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 H3BT86 120 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 COX6CP09669 75 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 Q1RN00 199 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 DGAT2L7PQ6IED9 249 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 ZNF843Q8N446 348 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 XCL2Q9UBD3 114 aa5.99□□□□□ -1.45
CSTF3-208ENST00000528865 H7C2G1 150 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 H7C423 109 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 CCL24O00175 119 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 CKS1BP61024 79 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 RPL36AP83881 106 aaKnown RBP5.98□□□□□ -1.45
CSTF3-208ENST00000528865 CIRBPQ14011 172 aaKnown RBP5.98□□□□□ -1.45
CSTF3-208ENST00000528865 NTM-AS1Q6ZSK4 140 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 STHQ8IWL8 128 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
CSTF3-208ENST00000528865 BBC3Q96PG8 261 aaPredicted RBP5.98□□□□□ -1.45
CSTF3-208ENST00000528865 CITED1Q99966 193 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms