RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RBMY1BA6NDE4 496 aaKnown RBP8.56□□□□□ -1.04
USF1-208ENST00000528768 RBMY1EA6NEQ0 496 aaKnown RBP8.56□□□□□ -1.04
USF1-208ENST00000528768 SAP30O75446 220 aa8.56□□□□□ -1.04
USF1-208ENST00000528768 RBMY1DP0C7P1 496 aaKnown RBP8.56□□□□□ -1.04
USF1-208ENST00000528768 TAL2Q16559 108 aa8.56□□□□□ -1.04
USF1-208ENST00000528768 OR11H2Q8NH07 326 aa8.56□□□□□ -1.04
USF1-208ENST00000528768 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
USF1-208ENST00000528768 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
USF1-208ENST00000528768 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
USF1-208ENST00000528768 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
USF1-208ENST00000528768 ODF3L2Q3SX64 289 aa8.55□□□□□ -1.04
USF1-208ENST00000528768 PCP2Q8IVA1 136 aa8.55□□□□□ -1.04
USF1-208ENST00000528768 C1QTNF4Q9BXJ3 329 aa8.55□□□□□ -1.04
USF1-208ENST00000528768 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
USF1-208ENST00000528768 NPSP0C0P6 89 aa8.54□□□□□ -1.04
USF1-208ENST00000528768 VAMP3Q15836 100 aa8.54□□□□□ -1.04
USF1-208ENST00000528768 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
USF1-208ENST00000528768 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
USF1-208ENST00000528768 H3BRM9 83 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 RS1O15537 224 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 CRYBA4P53673 196 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 TCTAP57738 103 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 ZNF124Q15973 351 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 CHAC1Q9BUX1 264 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 MUC4Q99102 2169 aa8.53□□□□□ -1.04
USF1-208ENST00000528768 TRAV8-6A0A0B4J262 113 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 E9PLD3 99 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 TAX1BP3O14907 124 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 CIDEAO60543 219 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 IGLV1-51P01701 117 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 UBE2V1Q13404 147 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 XCL2Q9UBD3 114 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
USF1-208ENST00000528768 DNAH1Q9P2D7 4330 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 TRBV25-1A0A075B6N4 114 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 TSHBP01222 138 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 SMAGPQ0VAQ4 97 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 CFAP126Q5VTH2 177 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 C11orf72Q8NBR9 251 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 VCX2Q9H322 139 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
USF1-208ENST00000528768 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
USF1-208ENST00000528768 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
USF1-208ENST00000528768 GCSHP23434 173 aa8.5□□□□□ -1.05
USF1-208ENST00000528768 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
USF1-208ENST00000528768 OR4C5Q8NGB2 326 aa8.5□□□□□ -1.05
USF1-208ENST00000528768 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
USF1-208ENST00000528768 IGHV3OR16-12A0A075B7B8 117 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 AZU1P20160 251 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
USF1-208ENST00000528768 COTL1Q14019 142 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 GTF2H5Q6ZYL4 71 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 MRPL16Q9NX20 251 aaKnown RBP8.49□□□□□ -1.05
USF1-208ENST00000528768 DNAH7Q8WXX0 4024 aa8.49□□□□□ -1.05
USF1-208ENST00000528768 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 C9orf118A6NHY6 69 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 CEND1Q8N111 149 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 C16orf74Q96GX8 76 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 HIST1H4GQ99525 98 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 TM2D2Q9BX73 214 aa8.48□□□□□ -1.05
USF1-208ENST00000528768 LYSTQ99698 3801 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 TRBV10-1A0A0K0K1A3 114 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 A6NJY4 79 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 INSL3P51460 131 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
USF1-208ENST00000528768 AGRNO00468 2067 aa8.46□□□□□ -1.05
USF1-208ENST00000528768 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 TRAV4A0A0B4J268 109 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 P0DMU3 169 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
USF1-208ENST00000528768 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.06
USF1-208ENST00000528768 DAZ2Q13117 558 aaKnown RBP8.46□□□□□ -1.06
USF1-208ENST00000528768 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.06
USF1-208ENST00000528768 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
USF1-208ENST00000528768 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
USF1-208ENST00000528768 RRN3P1Q2M238 152 aa8.45□□□□□ -1.06
USF1-208ENST00000528768 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
USF1-208ENST00000528768 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
USF1-208ENST00000528768 LEPROTO15243 131 aa8.44□□□□□ -1.06
USF1-208ENST00000528768 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms