RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 TMEM250H0YL14 139 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 CXCL1P09341 107 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 SMIM6P0DI80 62 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 CHCHD5Q9BSY4 110 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 CTDSP1Q9GZU7 261 aa12.04□□□□□ -0.48
CAPN1-206ENST00000526966 PANO1I0J062 215 aa12.03□□□□□ -0.48
CAPN1-206ENST00000526966 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
CAPN1-206ENST00000526966 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
CAPN1-206ENST00000526966 SNAI2O43623 268 aa12.02□□□□□ -0.49
CAPN1-206ENST00000526966 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
CAPN1-206ENST00000526966 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
CAPN1-206ENST00000526966 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
CAPN1-206ENST00000526966 TMEM97Q5BJF2 176 aa12.01□□□□□ -0.49
CAPN1-206ENST00000526966 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
CAPN1-206ENST00000526966 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-206ENST00000526966 AKR1D1P51857 326 aa12□□□□□ -0.49
CAPN1-206ENST00000526966 RBX1P62877 108 aa12□□□□□ -0.49
CAPN1-206ENST00000526966 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
CAPN1-206ENST00000526966 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
CAPN1-206ENST00000526966 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
CAPN1-206ENST00000526966 BAGE2Q86Y30 109 aa11.99□□□□□ -0.49
CAPN1-206ENST00000526966 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
CAPN1-206ENST00000526966 Q6ZRU5 148 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 C12orf57Q99622 126 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 NAT8Q9UHE5 227 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 KIF25-AS1Q9Y6Z4 181 aa11.98□□□□□ -0.49
CAPN1-206ENST00000526966 CNBPP62633 177 aaKnown RBP11.97□□□□□ -0.49
CAPN1-206ENST00000526966 ISOC2Q96AB3 205 aa11.97□□□□□ -0.49
CAPN1-206ENST00000526966 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
CAPN1-206ENST00000526966 TNXBP22105 4242 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 TRBV25-1A0A075B6N4 114 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 F5H697 171 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 GNG4P50150 75 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
CAPN1-206ENST00000526966 GAGE6Q13070 117 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 CENPWQ5EE01 88 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
CAPN1-206ENST00000526966 MUC21A0A0G2JKD1 596 aa11.95□□□□□ -0.5
CAPN1-206ENST00000526966 MUC21A0A140T8X8 626 aa11.95□□□□□ -0.5
CAPN1-206ENST00000526966 CEBPGP53567 150 aa11.94□□□□□ -0.5
CAPN1-206ENST00000526966 REG3AQ06141 175 aa11.94□□□□□ -0.5
CAPN1-206ENST00000526966 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
CAPN1-206ENST00000526966 LRP2P98164 4655 aa11.94□□□□□ -0.5
CAPN1-206ENST00000526966 ZNF727A8MUV8 499 aa11.93□□□□□ -0.5
CAPN1-206ENST00000526966 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
CAPN1-206ENST00000526966 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
CAPN1-206ENST00000526966 TMEM241Q24JQ0 296 aa11.93□□□□□ -0.5
CAPN1-206ENST00000526966 SMIM7Q9BQ49 75 aa11.93□□□□□ -0.5
CAPN1-206ENST00000526966 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 C20orf203Q8NBC4 194 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
CAPN1-206ENST00000526966 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
CAPN1-206ENST00000526966 M0QY20 66 aa11.91□□□□□ -0.5
CAPN1-206ENST00000526966 P01737 135 aa11.91□□□□□ -0.5
CAPN1-206ENST00000526966 S100PP25815 95 aa11.91□□□□□ -0.5
CAPN1-206ENST00000526966 RNF185Q96GF1 192 aa11.91□□□□□ -0.5
CAPN1-206ENST00000526966 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
CAPN1-206ENST00000526966 SLPIP03973 132 aa11.9□□□□□ -0.5
CAPN1-206ENST00000526966 SSTP61278 116 aa11.9□□□□□ -0.5
CAPN1-206ENST00000526966 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 A0A087WYN8 130 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 A0A1B0GUV1 79 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 PPP1R2P9O14990 202 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
CAPN1-206ENST00000526966 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-206ENST00000526966 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 K7EN84 100 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 CHTF8P0CG12 524 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 LINC01551Q86U37 167 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 RNF213Q63HN8 5207 aa11.88□□□□□ -0.51
CAPN1-206ENST00000526966 H7C1H1 209 aa11.87□□□□□ -0.51
CAPN1-206ENST00000526966 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
CAPN1-206ENST00000526966 GZMBP10144 247 aa11.87□□□□□ -0.51
CAPN1-206ENST00000526966 SUMO4Q6EEV6 95 aa11.87□□□□□ -0.51
CAPN1-206ENST00000526966 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
CAPN1-206ENST00000526966 MGPP08493 103 aa11.86□□□□□ -0.51
CAPN1-206ENST00000526966 S100A2P29034 98 aa11.86□□□□□ -0.51
CAPN1-206ENST00000526966 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
CAPN1-206ENST00000526966 CTAG1AP78358 180 aa11.86□□□□□ -0.51
CAPN1-206ENST00000526966 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
CAPN1-206ENST00000526966 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
CAPN1-206ENST00000526966 ADIRFQ15847 76 aa11.85□□□□□ -0.51
CAPN1-206ENST00000526966 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
CAPN1-206ENST00000526966 TRAV9-1A0A075B6T8 112 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms