RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 COTL1Q14019 142 aa14.47□□□□□ -0.09
SMCO4-203ENST00000526869 LGALS9CQ6DKI2 356 aa14.47□□□□□ -0.09
SMCO4-203ENST00000526869 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
SMCO4-203ENST00000526869 CELA1Q9UNI1 258 aa14.47□□□□□ -0.09
SMCO4-203ENST00000526869 HHLA3Q9XRX5 114 aa14.47□□□□□ -0.09
SMCO4-203ENST00000526869 ATP5G1P05496 136 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 LINC00694P0DN24 101 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 TMEM141Q96I45 108 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 SPATA25Q9BR10 227 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 ZMAT4Q9H898 229 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
SMCO4-203ENST00000526869 CRYBA4P53673 196 aa14.45□□□□□ -0.1
SMCO4-203ENST00000526869 TIMM17AQ99595 171 aa14.45□□□□□ -0.1
SMCO4-203ENST00000526869 TM2D3Q9BRN9 247 aa14.45□□□□□ -0.1
SMCO4-203ENST00000526869 GAGE12JA6NER3 117 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 PRB2P02812 416 aaPredicted RBP14.44□□□□□ -0.1
SMCO4-203ENST00000526869 GAGE1Q13065 139 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 GAGE4Q13068 117 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 GAGE5Q13069 117 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 GAGE13Q4V321 117 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 SBSPONQ8IVN8 264 aa14.44□□□□□ -0.1
SMCO4-203ENST00000526869 IGIPA6NJ69 53 aa14.43□□□□□ -0.1
SMCO4-203ENST00000526869 Q6ZN92 141 aa14.43□□□□□ -0.1
SMCO4-203ENST00000526869 PHLDA1Q8WV24 401 aaPredicted RBP14.43□□□□□ -0.1
SMCO4-203ENST00000526869 TRAV12-1A0A0B4J245 112 aa14.42□□□□□ -0.1
SMCO4-203ENST00000526869 PRSS1P07477 247 aa14.42□□□□□ -0.1
SMCO4-203ENST00000526869 NPSP0C0P6 89 aa14.42□□□□□ -0.1
SMCO4-203ENST00000526869 RPL39P62891 51 aaKnown RBP14.42□□□□□ -0.1
SMCO4-203ENST00000526869 CHCHD7Q9BUK0 85 aa14.42□□□□□ -0.1
SMCO4-203ENST00000526869 GTSF1LQ9H1H1 148 aa14.42□□□□□ -0.1
SMCO4-203ENST00000526869 IGHV3-38A0A0C4DH36 116 aa14.41□□□□□ -0.1
SMCO4-203ENST00000526869 H0Y8G0 127 aa14.41□□□□□ -0.1
SMCO4-203ENST00000526869 DEFB104AQ8WTQ1 72 aa14.41□□□□□ -0.1
SMCO4-203ENST00000526869 VAMP8Q9BV40 100 aa14.41□□□□□ -0.1
SMCO4-203ENST00000526869 PYGO1Q9Y3Y4 419 aa14.41□□□□□ -0.1
SMCO4-203ENST00000526869 LOC100131303A0A0U1RQF7 123 aa14.4□□□□□ -0.1
SMCO4-203ENST00000526869 ODF1Q14990 250 aa14.4□□□□□ -0.1
SMCO4-203ENST00000526869 TMEM97Q5BJF2 176 aa14.4□□□□□ -0.1
SMCO4-203ENST00000526869 DEFB121Q5J5C9 76 aa14.4□□□□□ -0.1
SMCO4-203ENST00000526869 BAALCQ8WXS3 180 aa14.39□□□□□ -0.11
SMCO4-203ENST00000526869 SPANXA1Q9NS26 97 aa14.39□□□□□ -0.11
SMCO4-203ENST00000526869 TRAV9-2A0A087WT02 112 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 A0A087WX48 190 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 PAX4O43316 350 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 GYPEP15421 78 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 C12orf74Q32Q52 190 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 TIMM21Q9BVV7 248 aa14.38□□□□□ -0.11
SMCO4-203ENST00000526869 PKIAP61925 76 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 SMAGPQ0VAQ4 97 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 PAPPA-AS1Q5QFB9 102 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 NTM-AS1Q6ZSK4 140 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 ZNF664Q8N3J9 261 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 VSIG2Q96IQ7 327 aa14.36□□□□□ -0.11
SMCO4-203ENST00000526869 A0A0J9YWU9 116 aa14.35□□□□□ -0.11
SMCO4-203ENST00000526869 PMVKQ15126 192 aa14.35□□□□□ -0.11
SMCO4-203ENST00000526869 ATOH7Q8N100 152 aa14.35□□□□□ -0.11
SMCO4-203ENST00000526869 TRAV26-1A0A087WT03 109 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 F5H768 121 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 H7C423 109 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 DPM2O94777 84 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 ATP6V0E2Q8NHE4 81 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 PMCHL2Q9BQD1 86 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 TMEM243Q9BU79 118 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 UBE2D4Q9Y2X8 147 aa14.34□□□□□ -0.11
SMCO4-203ENST00000526869 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 F8VRH5 84 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 TSTD3H0UI37 97 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 PLNP26678 52 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 SH2D6Q7Z4S9 175 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 MRPL52Q86TS9 123 aaKnown RBP14.33□□□□□ -0.12
SMCO4-203ENST00000526869 PAM16Q9Y3D7 125 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 TENM3Q9P273 2699 aa14.33□□□□□ -0.12
SMCO4-203ENST00000526869 TRBV25-1A0A075B6N4 114 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 TRBV6-8A0A0A6YYG3 113 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 IGKV2-29A2NJV5 120 aaPredicted RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 PRSS29PA6NIE9 313 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 HSBP1L1C9JCN9 74 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 H3BNG1 76 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 MRPS36P82909 103 aaKnown RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 SPATA45Q537H7 98 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 MRAPQ8TCY5 172 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 CST9LQ9H4G1 147 aa14.32□□□□□ -0.12
SMCO4-203ENST00000526869 MRPL35Q9NZE8 188 aaKnown RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 CHTOPQ9Y3Y2 248 aaKnown RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 CSDC2Q9Y534 153 aaKnown RBP14.32□□□□□ -0.12
SMCO4-203ENST00000526869 IGKCP01834 107 aa14.31□□□□□ -0.12
SMCO4-203ENST00000526869 HTN3P15516 51 aa14.3□□□□□ -0.12
SMCO4-203ENST00000526869 C11orf45Q8TAV5 145 aa14.3□□□□□ -0.12
SMCO4-203ENST00000526869 B9D2Q9BPU9 175 aa14.3□□□□□ -0.12
SMCO4-203ENST00000526869 A0A0J9YY99 117 aa14.29□□□□□ -0.12
SMCO4-203ENST00000526869 MRPL23Q16540 153 aaKnown RBP14.29□□□□□ -0.12
SMCO4-203ENST00000526869 FAM104AQ969W3 186 aa14.29□□□□□ -0.12
SMCO4-203ENST00000526869 AMELXQ99217 191 aa14.29□□□□□ -0.12
SMCO4-203ENST00000526869 VCX2Q9H322 139 aa14.29□□□□□ -0.12
SMCO4-203ENST00000526869 ICOSQ9Y6W8 199 aa14.29□□□□□ -0.12
SMCO4-203ENST00000526869 MAJINQ3KP22 176 aa14.28□□□□□ -0.12
SMCO4-203ENST00000526869 Q6ZTC4 211 aa14.28□□□□□ -0.12
SMCO4-203ENST00000526869 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
SMCO4-203ENST00000526869 UBE2L6O14933 153 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms