RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RIMS1Q86UR5 1692 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 PHLPP1O60346 1717 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ARHGEF28Q8N1W1 1705 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 MAST2Q6P0Q8 1798 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 NUP210LQ5VU65 1888 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 PLXNB3Q9ULL4 1909 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 MYH10P35580 1976 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 YLPM1P49750 1951 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 SCN9AQ15858 1988 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 DSCAMO60469 2012 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 ICE1Q9Y2F5 2266 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 CACNA1GO43497 2377 aa0.52□□□□□ -2.33
ECHDC1-219ENST00000526299 TRBV6-1A0A0K0K1D8 114 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 SPTY2D1-AS1A0A0U1RR47 76 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 LAMB4A4D0S4 1761 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 H0Y9P7 68 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 HCRTO43612 131 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 OBSL1O75147 1896 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 NDUFB1O75438 58 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 EPRSP07814 1512 aaKnown RBP0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 MRC1P22897 1456 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 ZNF137PP52743 207 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 EFNA4P52798 201 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 NUP98P52948 1817 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 CCL18P55774 89 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 UBE2D3P61077 147 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 UBE2D2P62837 147 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 KLKP1Q107X0 134 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 GAPVD1Q14C86 1478 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 TPRXLQ17RH7 258 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 SPINK13Q1W4C9 94 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 FER1L6Q2WGJ9 1857 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 FRMPD1Q5SYB0 1578 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 VIRMAQ69YN4 1812 aaKnown RBP0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 C18orf32Q8TCD1 76 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 SPACA4Q8TDM5 124 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 LINC01600Q96MT4 127 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 AMELYQ99218 206 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 KDM5DQ9BY66 1539 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 BPESC1Q9GZL8 116 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 OTOFQ9HC10 1997 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 CC2D2AQ9P2K1 1620 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 MYH2Q9UKX2 1941 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 PLXND1Q9Y4D7 1925 aa0.51□□□□□ -2.33
ECHDC1-219ENST00000526299 CUL9Q8IWT3 2517 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 DOCK10Q96BY6 2186 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 DSCAML1Q8TD84 2053 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 NUP205Q92621 2012 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 MYH7P12883 1935 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 DICER1Q9UPY3 1922 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ANKRD31Q8N7Z5 1873 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ATAD5Q96QE3 1844 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 KIF13AQ9H1H9 1805 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 SUPT6HQ7KZ85 1726 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 SHANK3Q9BYB0 1731 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ADGBQ8N7X0 1667 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 TOP2BQ02880 1626 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 DUOX2Q9NRD8 1548 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ATP10BO94823 1461 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 MAGI1Q96QZ7 1491 aaPredicted RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ARHGAP35Q9NRY4 1499 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 SHANK2Q9UPX8 1470 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ANKARQ7Z5J8 1434 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 I3L3M4 83 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 SPINK7P58062 85 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ATP5EP2Q5VTU8 51 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 Q5VV11 94 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 NCBP2-AS2Q69YL0 99 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 UNQ6190/PRO20217Q6UXQ8 127 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 Q6ZRX8 168 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 Q6ZSA8 131 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 VMO1Q7Z5L0 202 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 SMIM11BQ8TCY0 68 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 UBL5Q9BZL1 73 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 LINC01558Q9Y6Z2 57 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 MYH11P35749 1972 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 TNRC6AQ8NDV7 1962 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 HELZP42694 1942 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 XIRP1Q702N8 1843 aaKnown RBP0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 AKAP12Q02952 1782 aa0.5□□□□□ -2.33
ECHDC1-219ENST00000526299 ERCC6L2Q5T890 1561 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 ARHGEF12Q9NZN5 1544 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 NISCHQ9Y2I1 1504 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 POLEQ07864 2286 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 ADGRL2O95490 1459 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 ERVK-7P63135 1459 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 NCOA2Q15596 1464 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 HFM1A2PYH4 1435 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 GREB1Q4ZG55 1949 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 NBDYA0A0U1RRE5 68 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 LINC01549A6NIU2 74 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 H7BZZ5 65 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 INE1O15225 51 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 BCE1O60756 84 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 COX8AP10176 69 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 NREPQ16612 68 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 PIGYQ3MUY2 71 aa0.49□□□□□ -2.33
ECHDC1-219ENST00000526299 KRTAP26-1Q6PEX3 210 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms