RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 VCYO14598 125 aa11.98□□□□□ -0.49
PACSIN3-202ENST00000524509 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
PACSIN3-202ENST00000524509 NFE4Q86UQ8 179 aa11.98□□□□□ -0.49
PACSIN3-202ENST00000524509 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
PACSIN3-202ENST00000524509 TRBV24-1A0A075B6N3 115 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 HLA-DQA1P01909 254 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 MT-ND6P03923 174 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 C1orf134Q5TEV5 83 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 CHCHD5Q9BSY4 110 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 GNB1LQ9BYB4 327 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 PKD1P98161 4303 aa11.97□□□□□ -0.49
PACSIN3-202ENST00000524509 TRBV27A0A0K0K1C4 114 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 TMEM262E9PQX1 116 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 RPL32P62910 135 aaKnown RBP11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 TMEM136Q6ZRR5 245 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 NIT1Q86X76 327 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 KRTAP4-5Q9BYR2 181 aa11.96□□□□□ -0.49
PACSIN3-202ENST00000524509 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 D6R8Y8 96 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 H7C423 109 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 UBE2L6O14933 153 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 AMTP48728 403 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 LAGE3Q14657 143 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 C6orf223Q8N319 242 aa11.95□□□□□ -0.5
PACSIN3-202ENST00000524509 APCSP02743 223 aa11.94□□□□□ -0.5
PACSIN3-202ENST00000524509 POLR2KP53803 58 aaKnown RBP11.94□□□□□ -0.5
PACSIN3-202ENST00000524509 NRACQ8N912 160 aa11.94□□□□□ -0.5
PACSIN3-202ENST00000524509 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
PACSIN3-202ENST00000524509 FCER1GP30273 86 aa11.93□□□□□ -0.5
PACSIN3-202ENST00000524509 NTM-AS1Q6ZSK4 140 aa11.93□□□□□ -0.5
PACSIN3-202ENST00000524509 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
PACSIN3-202ENST00000524509 SMCO4Q9NRQ5 59 aa11.93□□□□□ -0.5
PACSIN3-202ENST00000524509 TRAV8-3A0A0A6YYJ7 113 aa11.92□□□□□ -0.5
PACSIN3-202ENST00000524509 IBA57-AS1B1ANH7 110 aa11.92□□□□□ -0.5
PACSIN3-202ENST00000524509 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
PACSIN3-202ENST00000524509 RTL8CO15255 209 aa11.92□□□□□ -0.5
PACSIN3-202ENST00000524509 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
PACSIN3-202ENST00000524509 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
PACSIN3-202ENST00000524509 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
PACSIN3-202ENST00000524509 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
PACSIN3-202ENST00000524509 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
PACSIN3-202ENST00000524509 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
PACSIN3-202ENST00000524509 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
PACSIN3-202ENST00000524509 Q0VG73 95 aa11.9□□□□□ -0.5
PACSIN3-202ENST00000524509 RMI2Q96E14 147 aa11.9□□□□□ -0.5
PACSIN3-202ENST00000524509 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
PACSIN3-202ENST00000524509 COX11Q9Y6N1 276 aa11.9□□□□□ -0.5
PACSIN3-202ENST00000524509 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
PACSIN3-202ENST00000524509 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
PACSIN3-202ENST00000524509 SMIM2Q9BVW6 85 aa11.89□□□□□ -0.51
PACSIN3-202ENST00000524509 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
PACSIN3-202ENST00000524509 K7EMI3 77 aa11.88□□□□□ -0.51
PACSIN3-202ENST00000524509 ZNF25P17030 456 aaPredicted RBP11.88□□□□□ -0.51
PACSIN3-202ENST00000524509 RAB5AP20339 215 aa11.88□□□□□ -0.51
PACSIN3-202ENST00000524509 GAGE6Q13070 117 aa11.88□□□□□ -0.51
PACSIN3-202ENST00000524509 AMMECR1LQ6DCA0 310 aa11.88□□□□□ -0.51
PACSIN3-202ENST00000524509 TSHBP01222 138 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 NPYP01303 97 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 CRPP02741 224 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 G0S2P27469 103 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 ATRAIDQ6UW56 229 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 HSPG2P98160 4391 aa11.87□□□□□ -0.51
PACSIN3-202ENST00000524509 ANGP03950 147 aaKnown RBP11.86□□□□□ -0.51
PACSIN3-202ENST00000524509 FABP9Q0Z7S8 132 aa11.86□□□□□ -0.51
PACSIN3-202ENST00000524509 TMEM101Q96IK0 257 aa11.86□□□□□ -0.51
PACSIN3-202ENST00000524509 NXT2Q9NPJ8 142 aaKnown RBP11.86□□□□□ -0.51
PACSIN3-202ENST00000524509 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 ESDP10768 282 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 RBX1P62877 108 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
PACSIN3-202ENST00000524509 EREGO14944 169 aa11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 PSCAO43653 123 aa11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 MIAQ16674 131 aa11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 Q8N8P6 123 aa11.83□□□□□ -0.52
PACSIN3-202ENST00000524509 FGF6P10767 208 aa11.82□□□□□ -0.52
PACSIN3-202ENST00000524509 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
PACSIN3-202ENST00000524509 MRPL52Q86TS9 123 aaKnown RBP11.82□□□□□ -0.52
PACSIN3-202ENST00000524509 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
PACSIN3-202ENST00000524509 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
PACSIN3-202ENST00000524509 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
PACSIN3-202ENST00000524509 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
PACSIN3-202ENST00000524509 Q8N976 141 aa11.81□□□□□ -0.52
PACSIN3-202ENST00000524509 OR5A1Q8NGJ0 315 aa11.81□□□□□ -0.52
PACSIN3-202ENST00000524509 Q9HAA7 133 aa11.81□□□□□ -0.52
PACSIN3-202ENST00000524509 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 LINC01549A6NIU2 74 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
PACSIN3-202ENST00000524509 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms