RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 C4orf3Q8WVX3 66 aa13□□□□□ -0.33
IKBKB-228ENST00000523517 LINC01587Q99440 93 aa13□□□□□ -0.33
IKBKB-228ENST00000523517 SPANXA1Q9NS26 97 aa13□□□□□ -0.33
IKBKB-228ENST00000523517 ERG28Q9UKR5 140 aa13□□□□□ -0.33
IKBKB-228ENST00000523517 TEN1Q86WV5 123 aa13□□□□□ -0.33
IKBKB-228ENST00000523517 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 UBE2D4Q9Y2X8 147 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.99□□□□□ -0.33
IKBKB-228ENST00000523517 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 PPDPFLQ8WWR9 84 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 CARD19Q96LW7 228 aa12.99□□□□□ -0.33
IKBKB-228ENST00000523517 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
IKBKB-228ENST00000523517 LITAFQ99732 161 aa12.98□□□□□ -0.33
IKBKB-228ENST00000523517 TINCRA0A1B0GVN0 87 aa12.98□□□□□ -0.33
IKBKB-228ENST00000523517 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
IKBKB-228ENST00000523517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.97□□□□□ -0.33
IKBKB-228ENST00000523517 IGKV2-29A2NJV5 120 aaPredicted RBP12.97□□□□□ -0.33
IKBKB-228ENST00000523517 H7C2G1 150 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 SORL1Q92673 2214 aa12.97□□□□□ -0.33
IKBKB-228ENST00000523517 PRB1P04280 392 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 FBN2P35556 2912 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
IKBKB-228ENST00000523517 INSP01308 110 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 VSIG2Q96IQ7 327 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 CDIP1Q9H305 208 aa12.96□□□□□ -0.33
IKBKB-228ENST00000523517 NDUFA12Q9UI09 145 aa12.95□□□□□ -0.34
IKBKB-228ENST00000523517 UTP20O75691 2785 aaKnown RBP12.95□□□□□ -0.34
IKBKB-228ENST00000523517 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
IKBKB-228ENST00000523517 Q6ZUT4 128 aa12.95□□□□□ -0.34
IKBKB-228ENST00000523517 RS1O15537 224 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 DEFB113Q30KQ7 82 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 ANKRD29Q8N6D5 301 aa12.94□□□□□ -0.34
IKBKB-228ENST00000523517 PRSS2P07478 247 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 FHL3Q13643 280 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 Q1RN00 199 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 ADAMTSL4-AS1Q5T5F5 129 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 SLC25A20O43772 301 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
IKBKB-228ENST00000523517 A8MZ25 164 aa12.92□□□□□ -0.34
IKBKB-228ENST00000523517 C9JAW5 83 aa12.92□□□□□ -0.34
IKBKB-228ENST00000523517 ZANQ9Y493 2812 aa12.92□□□□□ -0.34
IKBKB-228ENST00000523517 M0QXV9 152 aa12.92□□□□□ -0.34
IKBKB-228ENST00000523517 GEMIN7Q9H840 131 aaKnown RBP12.92□□□□□ -0.34
IKBKB-228ENST00000523517 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
IKBKB-228ENST00000523517 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
IKBKB-228ENST00000523517 MIAQ16674 131 aa12.9□□□□□ -0.34
IKBKB-228ENST00000523517 Q96MF0 132 aa12.9□□□□□ -0.34
IKBKB-228ENST00000523517 POLQO75417 2590 aa12.9□□□□□ -0.34
IKBKB-228ENST00000523517 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 ATXN8Q156A1 80 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 ZFAND6Q6FIF0 208 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 LRRC75A-AS1Q8N1F1 130 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 ANKRD17O75179 2603 aaKnown RBP12.89□□□□□ -0.35
IKBKB-228ENST00000523517 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 MYO18BQ8IUG5 2567 aa12.89□□□□□ -0.35
IKBKB-228ENST00000523517 TIRAPP58753 221 aa12.88□□□□□ -0.35
IKBKB-228ENST00000523517 TRIAP1O43715 76 aa12.88□□□□□ -0.35
IKBKB-228ENST00000523517 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
IKBKB-228ENST00000523517 ACACBO00763 2458 aa12.88□□□□□ -0.35
IKBKB-228ENST00000523517 MXRA5Q9NR99 2828 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 DGAT2L7PQ6IED9 249 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 Q6ZSV7 163 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 C1orf158Q8N1D5 194 aa12.87□□□□□ -0.35
IKBKB-228ENST00000523517 BBC3Q96PG8 261 aaPredicted RBP12.87□□□□□ -0.35
IKBKB-228ENST00000523517 IGHV3OR16-12A0A075B7B8 117 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 TIMM17BO60830 172 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 STHQ8IWL8 128 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 TMEM86BQ8N661 226 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 CR1P17927 2039 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 MT-ATP8P03928 68 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 XGP55808 180 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 IL17DQ8TAD2 202 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
IKBKB-228ENST00000523517 NPC2P61916 151 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
IKBKB-228ENST00000523517 RNF183Q96D59 192 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 TRGV1A0A0A0MS02 117 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 TMEM101Q96IK0 257 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 ICOSQ9Y6W8 199 aa12.85□□□□□ -0.35
IKBKB-228ENST00000523517 NDUFA1O15239 70 aa12.84□□□□□ -0.35
IKBKB-228ENST00000523517 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
IKBKB-228ENST00000523517 COX6A2Q02221 97 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms