RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZC2HC1AQ96GY0 325 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 NDFIP1Q9BT67 221 aa4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RNASE7Q9H1E1 156 aaKnown RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
SDCBP-210ENST00000522843 XKRY2A2RUG3 117 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 A4D1N5 150 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-210ENST00000522843 INSP01308 110 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 MGST1P10620 155 aaKnown RBP4.37□□□□□ -1.71
SDCBP-210ENST00000522843 ZNF80P51504 273 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-210ENST00000522843 ERCC8Q13216 396 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 TDRG1Q3Y452 100 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 ATP5L2Q7Z4Y8 100 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 Q8N814 137 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 GATD1Q8NB37 220 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 ZNF738Q8NE65 137 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 TP53TG3Q9ULZ0 132 aa4.37□□□□□ -1.71
SDCBP-210ENST00000522843 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-210ENST00000522843 TGIF2-C20orf24A0A0A6YYL0 155 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 TRAV21A0A0B4J279 112 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 A0A1B0GW15 77 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 F2Z2F3 143 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 SH2D1AO60880 128 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 GAGE5Q13069 117 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 GAGE6Q13070 117 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 WFDC2Q14508 124 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 EBLN2Q6P2I7 272 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 Q75L30 129 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
SDCBP-210ENST00000522843 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 A0A1B0GXF2 115 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 MT-ND6P03923 174 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 IGLC6P0CF74 106 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 HTN1P15515 57 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 LEPP41159 167 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 LYPD5Q6UWN5 251 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 WFDC10BQ8IUB3 73 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 OR2D3Q8NGH3 330 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 C16orf74Q96GX8 76 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 LINC01587Q99440 93 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 SPXQ9BT56 116 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 GSN-AS1Q9NRJ2 163 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
SDCBP-210ENST00000522843 C1orf196B1AJZ1 125 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 SNAI2O43623 268 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 GPX1P07203 203 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 OR5AL1P0C617 328 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 CTRLP40313 264 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 CDKN1BP46527 198 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
SDCBP-210ENST00000522843 LINC01620Q4KN68 170 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 COA6Q5JTJ3 125 aaKnown RBP4.34□□□□□ -1.71
SDCBP-210ENST00000522843 LELP1Q5T871 98 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 Q8TAT8 98 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.71
SDCBP-210ENST00000522843 PTH2Q96A98 100 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 KCNS1Q96KK3 526 aa4.34□□□□□ -1.71
SDCBP-210ENST00000522843 A0A1B0GUT8 65 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 HLA-DQA1P01909 254 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 ORM1P02763 201 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 TRGC2P03986 189 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 S100A8P05109 93 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 RAB5BP61020 215 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 RIGQ13278 110 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 PRR9Q5T870 116 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 Q6ZTI0 123 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SDCBP-210ENST00000522843 C7orf71A4D174 169 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 RNASE4P34096 147 aaKnown RBP4.32□□□□□ -1.72
SDCBP-210ENST00000522843 CACNG7P62955 275 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 HBBP68871 147 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 Q0VG73 95 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 TMEM256Q8N2U0 113 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 TRAPPC1Q9Y5R8 145 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 FSIP2Q5CZC0 6907 aa4.32□□□□□ -1.72
SDCBP-210ENST00000522843 TRAV9-2A0A087WT02 112 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 RS1O15537 224 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 GZMBP10144 247 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms