RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MLST8Q9BVC4 326 aa9.52□□□□□ -0.89
PRKDC-204ENST00000521331 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 P01737 135 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 REG3AQ06141 175 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 PEA15Q15121 130 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
PRKDC-204ENST00000521331 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
PRKDC-204ENST00000521331 SCO2A0A1W2PP80 73 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 C5orf52A6NGY3 159 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 H7C1H1 209 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 MT-ND4LP03901 98 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 S100A8P05109 93 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 AP5S1Q9NUS5 200 aa9.5□□□□□ -0.89
PRKDC-204ENST00000521331 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 IGHV3-64A0A075B6Q5 118 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 C9JQL5 133 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 SSTP61278 116 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 C12orf57Q99622 126 aa9.49□□□□□ -0.89
PRKDC-204ENST00000521331 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 GZMBP10144 247 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 RAB5BP61020 215 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 RHEBQ15382 184 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 YPEL4Q96NS1 127 aa9.48□□□□□ -0.89
PRKDC-204ENST00000521331 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
PRKDC-204ENST00000521331 M0QY20 66 aa9.47□□□□□ -0.89
PRKDC-204ENST00000521331 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
PRKDC-204ENST00000521331 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
PRKDC-204ENST00000521331 A0A087WYN8 130 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 MGPP08493 103 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 FAM213BQ8TBF2 198 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
PRKDC-204ENST00000521331 A0A1B0GV50 99 aa9.45□□□□□ -0.9
PRKDC-204ENST00000521331 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
PRKDC-204ENST00000521331 SUMO4Q6EEV6 95 aa9.45□□□□□ -0.9
PRKDC-204ENST00000521331 WDR73Q6P4I2 378 aa9.45□□□□□ -0.9
PRKDC-204ENST00000521331 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
PRKDC-204ENST00000521331 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
PRKDC-204ENST00000521331 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 SLPIP03973 132 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
PRKDC-204ENST00000521331 CACNG7P62955 275 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 PGLYRP4Q96LB8 373 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 PLAC8Q9NZF1 115 aa9.44□□□□□ -0.9
PRKDC-204ENST00000521331 UBE2L6O14933 153 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 CHTF8P0CG12 524 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 CFAP161Q6P656 301 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 DPH3P1Q9H4G8 78 aa9.43□□□□□ -0.9
PRKDC-204ENST00000521331 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
PRKDC-204ENST00000521331 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
PRKDC-204ENST00000521331 RAB5AP20339 215 aa9.42□□□□□ -0.9
PRKDC-204ENST00000521331 AKR1D1P51857 326 aa9.42□□□□□ -0.9
PRKDC-204ENST00000521331 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
PRKDC-204ENST00000521331 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 F2Z2F3 143 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 PHOX2AO14813 284 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 COTL1Q14019 142 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
PRKDC-204ENST00000521331 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
PRKDC-204ENST00000521331 AMTP48728 403 aa9.4□□□□□ -0.9
PRKDC-204ENST00000521331 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
PRKDC-204ENST00000521331 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
PRKDC-204ENST00000521331 SMIM12Q96EX1 92 aa9.4□□□□□ -0.9
PRKDC-204ENST00000521331 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
PRKDC-204ENST00000521331 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
PRKDC-204ENST00000521331 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
PRKDC-204ENST00000521331 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 S100PP25815 95 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 COX6A2Q02221 97 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
PRKDC-204ENST00000521331 TNXBP22105 4242 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 IFNA1P01562 189 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
PRKDC-204ENST00000521331 CCL20P78556 96 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 TMEM242Q9NWH2 141 aa9.37□□□□□ -0.91
PRKDC-204ENST00000521331 LRP2P98164 4655 aa9.36□□□□□ -0.91
PRKDC-204ENST00000521331 S100A6P06703 90 aa9.36□□□□□ -0.91
PRKDC-204ENST00000521331 NTF3P20783 257 aa9.36□□□□□ -0.91
PRKDC-204ENST00000521331 GNG4P50150 75 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms