RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 TMEM141Q96I45 108 aa11.29□□□□□ -0.6
SNHG6-201ENST00000520348 SCGB3A1Q96QR1 104 aa11.29□□□□□ -0.6
SNHG6-201ENST00000520348 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
SNHG6-201ENST00000520348 RETNQ9HD89 108 aa11.29□□□□□ -0.6
SNHG6-201ENST00000520348 DEFB4AO15263 64 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 NPSP0C0P6 89 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 DAD1P61803 113 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 COTL1Q14019 142 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 TM2D3Q9BRN9 247 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 PRO0255Q9UI72 69 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 PYGO1Q9Y3Y4 419 aa11.28□□□□□ -0.6
SNHG6-201ENST00000520348 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.61
SNHG6-201ENST00000520348 SBSPONQ8IVN8 264 aa11.27□□□□□ -0.61
SNHG6-201ENST00000520348 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
SNHG6-201ENST00000520348 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
SNHG6-201ENST00000520348 MGAM2Q2M2H8 2515 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 ATP5G1P05496 136 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 GAGE1Q13065 139 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 GAGE4Q13068 117 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 GAGE5Q13069 117 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 GAGE13Q4V321 117 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
SNHG6-201ENST00000520348 NOTCH1P46531 2555 aa11.25□□□□□ -0.61
SNHG6-201ENST00000520348 A0A087WX48 190 aa11.25□□□□□ -0.61
SNHG6-201ENST00000520348 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
SNHG6-201ENST00000520348 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
SNHG6-201ENST00000520348 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
SNHG6-201ENST00000520348 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
SNHG6-201ENST00000520348 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 PRB2P02812 416 aaPredicted RBP11.24□□□□□ -0.61
SNHG6-201ENST00000520348 PRSS1P07477 247 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 PKIAP61925 76 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 Q6ZN92 141 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
SNHG6-201ENST00000520348 H0Y8G0 127 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 PMCHL2Q9BQD1 86 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
SNHG6-201ENST00000520348 F8VRH5 84 aa11.22□□□□□ -0.61
SNHG6-201ENST00000520348 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
SNHG6-201ENST00000520348 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
SNHG6-201ENST00000520348 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
SNHG6-201ENST00000520348 GYPEP15421 78 aa11.21□□□□□ -0.61
SNHG6-201ENST00000520348 PMVKQ15126 192 aa11.21□□□□□ -0.61
SNHG6-201ENST00000520348 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
SNHG6-201ENST00000520348 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
SNHG6-201ENST00000520348 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 TSTD3H0UI37 97 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 H7C423 109 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 PAX4O43316 350 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 DPM2O94777 84 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 MRPS36P82909 103 aaKnown RBP11.2□□□□□ -0.62
SNHG6-201ENST00000520348 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 AMELXQ99217 191 aa11.2□□□□□ -0.62
SNHG6-201ENST00000520348 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
SNHG6-201ENST00000520348 IGKCP01834 107 aa11.19□□□□□ -0.62
SNHG6-201ENST00000520348 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
SNHG6-201ENST00000520348 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
SNHG6-201ENST00000520348 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
SNHG6-201ENST00000520348 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
SNHG6-201ENST00000520348 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
SNHG6-201ENST00000520348 H3BNG1 76 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 PLNP26678 52 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
SNHG6-201ENST00000520348 A0A0J9YWU9 116 aa11.17□□□□□ -0.62
SNHG6-201ENST00000520348 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
SNHG6-201ENST00000520348 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
SNHG6-201ENST00000520348 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
SNHG6-201ENST00000520348 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
SNHG6-201ENST00000520348 F5H768 121 aa11.16□□□□□ -0.62
SNHG6-201ENST00000520348 IGLC3P0DOY3 106 aa11.16□□□□□ -0.62
SNHG6-201ENST00000520348 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
SNHG6-201ENST00000520348 NFE4Q86UQ8 179 aa11.16□□□□□ -0.62
SNHG6-201ENST00000520348 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
SNHG6-201ENST00000520348 HSBP1L1C9JCN9 74 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 FGF6P10767 208 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 Q6ZUT4 128 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 TENM3Q9P273 2699 aa11.15□□□□□ -0.62
SNHG6-201ENST00000520348 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
SNHG6-201ENST00000520348 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
SNHG6-201ENST00000520348 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms