RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 FER1L6-AS1Q8NA97 138 aa5.49□□□□□ -1.53
PABPC1-213ENST00000519848 OR2D3Q8NGH3 330 aa5.49□□□□□ -1.53
PABPC1-213ENST00000519848 RPL39LQ96EH5 51 aaKnown RBP5.49□□□□□ -1.53
PABPC1-213ENST00000519848 AP1S3Q96PC3 154 aa5.49□□□□□ -1.53
PABPC1-213ENST00000519848 TPPP3Q9BW30 176 aa5.49□□□□□ -1.53
PABPC1-213ENST00000519848 F5H697 171 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 SULT1A2P50226 295 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 RAB5CP51148 216 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 REG3AQ06141 175 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 Q6ZNX1 250 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 GATD1Q8NB37 220 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 GTSF1Q8WW33 167 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 RMI2Q96E14 147 aa5.48□□□□□ -1.53
PABPC1-213ENST00000519848 A0A0D9SG52 128 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 KANTRA0A1W2PQU2 76 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 PFDN1O60925 122 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 CRPP02741 224 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 RPL37AP61513 92 aaKnown RBP5.47□□□□□ -1.53
PABPC1-213ENST00000519848 Q0VG73 95 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 RNASE7Q9H1E1 156 aaKnown RBP5.47□□□□□ -1.53
PABPC1-213ENST00000519848 COX11Q9Y6N1 276 aa5.47□□□□□ -1.53
PABPC1-213ENST00000519848 IGHV1-24A0A0C4DH33 117 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 S100A9P06702 114 aaKnown RBP5.46□□□□□ -1.54
PABPC1-213ENST00000519848 BCL2P10415 239 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 NTF3P20783 257 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 MEF2BQ02080 365 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-213ENST00000519848 MIAQ16674 131 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 NUDT10Q8NFP7 164 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 SPACA4Q8TDM5 124 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 NUDT11Q96G61 164 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 CNFNQ9BYD5 112 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 MANBALQ9NQG1 85 aa5.46□□□□□ -1.54
PABPC1-213ENST00000519848 TRBV25-1A0A075B6N4 114 aa5.45□□□□□ -1.54
PABPC1-213ENST00000519848 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
PABPC1-213ENST00000519848 ELOBQ15370 118 aa5.45□□□□□ -1.54
PABPC1-213ENST00000519848 RASL11AQ6T310 242 aa5.45□□□□□ -1.54
PABPC1-213ENST00000519848 C9orf62Q8N4C0 152 aa5.45□□□□□ -1.54
PABPC1-213ENST00000519848 TNXBP22105 4242 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-213ENST00000519848 A0A087WYN8 130 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-213ENST00000519848 FAM231BA6NCW3 169 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 GNG4P50150 75 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 PRSS3P2Q8NHM4 247 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 OCC1Q8TAD7 63 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 LINC00526Q96FQ7 95 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 TMEM243Q9BU79 118 aa5.44□□□□□ -1.54
PABPC1-213ENST00000519848 hDV102S1A0JD36 115 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 P01737 135 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 RPS10P46783 165 aaKnown RBP5.43□□□□□ -1.54
PABPC1-213ENST00000519848 TCTE3Q8IZS6 198 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 PGLYRP4Q96LB8 373 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 MED9Q9NWA0 146 aa5.43□□□□□ -1.54
PABPC1-213ENST00000519848 A0A096LNI7 61 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 IGKV3OR2-268A0A0C4DH90 116 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 OXTP01178 125 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 IFNA1P01562 189 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 AMTP48728 403 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 CACNG7P62955 275 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 FOXI1Q12951 378 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 C14orf177Q52M58 125 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 DGAT2L7PQ6IED9 249 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 ALKAL2Q6UX46 152 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 RNF185Q96GF1 192 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 RPP21Q9H633 154 aaKnown RBP5.42□□□□□ -1.54
PABPC1-213ENST00000519848 NIT2Q9NQR4 276 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 LRP2P98164 4655 aa5.42□□□□□ -1.54
PABPC1-213ENST00000519848 PHOX2AO14813 284 aa5.41□□□□□ -1.54
PABPC1-213ENST00000519848 TSHBP01222 138 aa5.41□□□□□ -1.54
PABPC1-213ENST00000519848 SMIM17P0DL12 118 aa5.41□□□□□ -1.54
PABPC1-213ENST00000519848 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
PABPC1-213ENST00000519848 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
PABPC1-213ENST00000519848 PLAC8Q9NZF1 115 aa5.41□□□□□ -1.54
PABPC1-213ENST00000519848 PDE6DO43924 150 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 COX6A2Q02221 97 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 TMEM97Q5BJF2 176 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 KCNIP4Q6PIL6 250 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 LYPD6BQ8NI32 183 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 CHCHD10Q8WYQ3 142 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-213ENST00000519848 FAM104AQ969W3 186 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 TMEM242Q9NWH2 141 aa5.4□□□□□ -1.54
PABPC1-213ENST00000519848 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-213ENST00000519848 C9JQL5 133 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 SMKR1H3BMG3 65 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 NCR2O95944 276 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 TRGC1P0CF51 173 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 FGF6P10767 208 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 ESDP10768 282 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 COTL1Q14019 142 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 TWIST1Q15672 202 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
PABPC1-213ENST00000519848 IGHV3-64A0A075B6Q5 118 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 TRAV8-4A0A0B4J246 113 aa5.38□□□□□ -1.55
PABPC1-213ENST00000519848 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms