RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 Q8N8P6 123 aa9.75□□□□□ -0.85
SDC2-203ENST00000519587 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
SDC2-203ENST00000519587 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
SDC2-203ENST00000519587 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
SDC2-203ENST00000519587 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
SDC2-203ENST00000519587 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
SDC2-203ENST00000519587 HYDINQ4G0P3 5121 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 UBE2L6O14933 153 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 TSHBP01222 138 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 RAB5BP61020 215 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 LGALS9CQ6DKI2 356 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 FA2HQ7L5A8 372 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
SDC2-203ENST00000519587 LYSTQ99698 3801 aa9.72□□□□□ -0.85
SDC2-203ENST00000519587 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
SDC2-203ENST00000519587 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
SDC2-203ENST00000519587 ORMDL2Q53FV1 153 aa9.72□□□□□ -0.85
SDC2-203ENST00000519587 G0S2P27469 103 aa9.71□□□□□ -0.86
SDC2-203ENST00000519587 IFI27P40305 119 aaPredicted RBP9.71□□□□□ -0.86
SDC2-203ENST00000519587 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.86
SDC2-203ENST00000519587 TMEM18Q96B42 140 aa9.71□□□□□ -0.86
SDC2-203ENST00000519587 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 H7C423 109 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 SIVA1O15304 175 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 LAGE3Q14657 143 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 AP5S1Q9NUS5 200 aa9.7□□□□□ -0.86
SDC2-203ENST00000519587 A0A087WX48 190 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 AMMECR1LQ6DCA0 310 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
SDC2-203ENST00000519587 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 WFDC10BQ8IUB3 73 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 DEFB104AQ8WTQ1 72 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
SDC2-203ENST00000519587 LY6G6CO95867 125 aa9.68□□□□□ -0.86
SDC2-203ENST00000519587 ESDP10768 282 aa9.68□□□□□ -0.86
SDC2-203ENST00000519587 Q0VG73 95 aa9.68□□□□□ -0.86
SDC2-203ENST00000519587 NIT1Q86X76 327 aa9.68□□□□□ -0.86
SDC2-203ENST00000519587 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 DNAH10OSP0CZ25 163 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 GAGE6Q13070 117 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
SDC2-203ENST00000519587 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
SDC2-203ENST00000519587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
SDC2-203ENST00000519587 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
SDC2-203ENST00000519587 K7EP13 123 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BKO60814 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BJP06899 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 LINC00614P0C842 121 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BOP23527 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BBP33778 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BDP58876 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BCP62807 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST2H2BEQ16778 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.66□□□□□ -0.86
SDC2-203ENST00000519587 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BHQ93079 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BNQ99877 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 HIST1H2BMQ99879 126 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 Q9H8V8 135 aa9.66□□□□□ -0.86
SDC2-203ENST00000519587 FGF6P10767 208 aa9.65□□□□□ -0.86
SDC2-203ENST00000519587 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.86
SDC2-203ENST00000519587 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
SDC2-203ENST00000519587 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.87
SDC2-203ENST00000519587 STARD9Q9P2P6 4700 aa9.65□□□□□ -0.87
SDC2-203ENST00000519587 HSBP1O75506 76 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 DGAT2L7PQ6IED9 249 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
SDC2-203ENST00000519587 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
SDC2-203ENST00000519587 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 RBX1P62877 108 aa9.63□□□□□ -0.87
SDC2-203ENST00000519587 SERF1AO75920 110 aa9.62□□□□□ -0.87
SDC2-203ENST00000519587 HBDP02042 147 aa9.62□□□□□ -0.87
SDC2-203ENST00000519587 ANGP03950 147 aaKnown RBP9.62□□□□□ -0.87
SDC2-203ENST00000519587 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
SDC2-203ENST00000519587 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
SDC2-203ENST00000519587 CSDC2Q9Y534 153 aaKnown RBP9.62□□□□□ -0.87
SDC2-203ENST00000519587 HERC2O95714 4834 aa9.62□□□□□ -0.87
SDC2-203ENST00000519587 TOMM6Q96B49 74 aa9.61□□□□□ -0.87
SDC2-203ENST00000519587 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
SDC2-203ENST00000519587 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
SDC2-203ENST00000519587 NBDYA0A0U1RRE5 68 aa9.6□□□□□ -0.87
SDC2-203ENST00000519587 CRPP02741 224 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms