RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 RAB4BP61018 213 aa5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 RPL36AP83881 106 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 SPANXN1Q5VSR9 72 aa5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 SLC51BQ86UW2 128 aa5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 RPL36ALQ969Q0 106 aaKnown RBP5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
CTNNA1-215ENST00000519309 A0A1B0GVG6 124 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 K7EN84 100 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 SLPIP03973 132 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 GNG4P50150 75 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 ALKAL2Q6UX46 152 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 OR2D3Q8NGH3 330 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 MED9Q9NWA0 146 aa5.23□□□□□ -1.57
CTNNA1-215ENST00000519309 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 TMEM262E9PQX1 116 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 M0QY20 66 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 PDE6DO43924 150 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 NKX2-5P52952 324 aaPredicted RBP5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 SUMO4Q6EEV6 95 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 EIF5AL1Q6IS14 154 aaKnown RBP5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 AKAP14Q86UN6 197 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 FER1L6-AS1Q8NA97 138 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 AP1S3Q96PC3 154 aa5.22□□□□□ -1.57
CTNNA1-215ENST00000519309 F5H697 171 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 MGPP08493 103 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 RBX1P62877 108 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 SRSF9Q13242 221 aaKnown RBP eCLIP5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 LYZL1Q6UWQ5 148 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 NUDT10Q8NFP7 164 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 NUDT11Q96G61 164 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 MRPL18Q9H0U6 180 aaKnown RBP5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 RNASE7Q9H1E1 156 aaKnown RBP5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 AP5S1Q9NUS5 200 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 VAX2Q9UIW0 290 aa5.21□□□□□ -1.58
CTNNA1-215ENST00000519309 IGLV10-54A0A075B6I4 117 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 IFNA1P01562 189 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 P01737 135 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 CTRLP40313 264 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 FOXA3P55318 350 aaPredicted RBP5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 TMEM97Q5BJF2 176 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 LINC00269Q8N2A0 174 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 OCC1Q8TAD7 63 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 GTSF1Q8WW33 167 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 SMIM12Q96EX1 92 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 CHCHD5Q9BSY4 110 aa5.2□□□□□ -1.58
CTNNA1-215ENST00000519309 TRAV8-4A0A0B4J246 113 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 NDUFS6O75380 124 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 SMIM17P0DL12 118 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 NTF3P20783 257 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 RPS20P60866 119 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 REG3AQ06141 175 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 GAGE6Q13070 117 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 C15orf56Q8N910 161 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 LYPD6BQ8NI32 183 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 DPH3Q96FX2 82 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 CNFNQ9BYD5 112 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 GFRA4Q9GZZ7 299 aa5.19□□□□□ -1.58
CTNNA1-215ENST00000519309 TRAV26-2A0A0B4J265 109 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 CACNG7P62955 275 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 COX6A2Q02221 97 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 IQCJQ1A5X6 159 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 MAJINQ3KP22 176 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 STPG4Q8N801 248 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 GATD1Q8NB37 220 aa5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 RPP21Q9H633 154 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-215ENST00000519309 IGLV4-60A0A075B6I1 120 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 FAM231BA6NCW3 169 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 F2Z2F3 143 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 RASL11AQ6T310 242 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 Q6ZRP5 223 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 C20orf203Q8NBC4 194 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
CTNNA1-215ENST00000519309 TRBV25-1A0A075B6N4 114 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 A0A096LNI7 61 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 IGHV1-24A0A0C4DH33 117 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 IGKV2-24A0A0C4DH68 120 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 XKRY2A2RUG3 117 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 TMEM250H0YL14 139 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 H7C1H1 209 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 TAGLN2P37802 199 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 RPS10P46783 165 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 CEBPGP53567 150 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 TWIST1Q15672 202 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 RPL39LQ96EH5 51 aaKnown RBP5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 NIT2Q9NQR4 276 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 LINC00474Q9P2X8 69 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 PSORS1C2Q9UIG4 136 aa5.16□□□□□ -1.58
CTNNA1-215ENST00000519309 A0A1B0GUV1 79 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 C9JQL5 133 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 TRGC1P0CF51 173 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 BLOC1S1P78537 153 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 ZNF664Q8N3J9 261 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 PGLYRP4Q96LB8 373 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 BIN3Q9NQY0 253 aa5.15□□□□□ -1.59
CTNNA1-215ENST00000519309 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 GATCO43716 136 aaKnown RBP5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 SRP19P09132 144 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms