RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 HIST3H2BBQ8N257 126 aa12.77□□□□□ -0.37
CTNNA1-213ENST00000519113 SYT8Q8NBV8 401 aa12.77□□□□□ -0.37
CTNNA1-213ENST00000519113 RAB4AP20338 218 aa12.76□□□□□ -0.37
CTNNA1-213ENST00000519113 C18orf32Q8TCD1 76 aa12.76□□□□□ -0.37
CTNNA1-213ENST00000519113 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 PPBPP02775 128 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 PLA2G1BP04054 148 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 CKS2P33552 79 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 AKR1D1P51857 326 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 PDZD11Q5EBL8 140 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
CTNNA1-213ENST00000519113 D6R8Y8 96 aa12.74□□□□□ -0.37
CTNNA1-213ENST00000519113 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
CTNNA1-213ENST00000519113 PRELID3AQ96N28 172 aa12.74□□□□□ -0.37
CTNNA1-213ENST00000519113 AP1S3Q96PC3 154 aa12.74□□□□□ -0.37
CTNNA1-213ENST00000519113 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
CTNNA1-213ENST00000519113 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
CTNNA1-213ENST00000519113 SERF1AO75920 110 aa12.73□□□□□ -0.37
CTNNA1-213ENST00000519113 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
CTNNA1-213ENST00000519113 GYPEP15421 78 aa12.73□□□□□ -0.37
CTNNA1-213ENST00000519113 ESDP10768 282 aa12.72□□□□□ -0.37
CTNNA1-213ENST00000519113 SERTAD4-AS1Q5TG53 156 aa12.72□□□□□ -0.37
CTNNA1-213ENST00000519113 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
CTNNA1-213ENST00000519113 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
CTNNA1-213ENST00000519113 Q8N814 137 aa12.71□□□□□ -0.37
CTNNA1-213ENST00000519113 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.37
CTNNA1-213ENST00000519113 MRAP2Q96G30 205 aa12.71□□□□□ -0.37
CTNNA1-213ENST00000519113 FAM30AQ9NZY2 134 aa12.71□□□□□ -0.37
CTNNA1-213ENST00000519113 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 NUPR1O60356 82 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 FABP4P15090 132 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 RNASEKQ6P5S7 137 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 NIT1Q86X76 327 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 ZNF479Q96JC4 524 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 SPXQ9BT56 116 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
CTNNA1-213ENST00000519113 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 M0R2P5 195 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 NCR2O95944 276 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 MGPP08493 103 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 LINC00310P59036 64 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 ZNF876PQ49A33 203 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 PTH2Q96A98 100 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 CHCHD1Q96BP2 118 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 HIST1H2BLQ99880 126 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
CTNNA1-213ENST00000519113 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
CTNNA1-213ENST00000519113 RASL10AQ92737 203 aa12.68□□□□□ -0.38
CTNNA1-213ENST00000519113 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 NPYP01303 97 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 LINC00614P0C842 121 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 TIRAPP58753 221 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 PIK3CD-AS1Q5SR53 167 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 OR10D4PQ8NGN7 298 aa12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 PACRGQ96M98 296 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-213ENST00000519113 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 HSBP1O75506 76 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 TNFRSF6BO95407 300 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 LINC01556Q5JQF7 62 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 MAP1LC3AQ9H492 121 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 DNAH8Q96JB1 4490 aa12.66□□□□□ -0.38
CTNNA1-213ENST00000519113 A0A087WWL8 130 aa12.65□□□□□ -0.38
CTNNA1-213ENST00000519113 PPP1R17O96001 155 aa12.65□□□□□ -0.38
CTNNA1-213ENST00000519113 JPT2Q9H910 190 aa12.65□□□□□ -0.38
CTNNA1-213ENST00000519113 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 A8MWV9 139 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 F5H697 171 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 PMCHP20382 165 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 AMTP48728 403 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 Q9HAA7 133 aa12.64□□□□□ -0.39
CTNNA1-213ENST00000519113 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 URB1-AS1Q96HZ7 61 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 HMCN2Q8NDA2 5059 aa12.63□□□□□ -0.39
CTNNA1-213ENST00000519113 Q6ZSA8 131 aa12.62□□□□□ -0.39
CTNNA1-213ENST00000519113 NRACQ8N912 160 aa12.62□□□□□ -0.39
CTNNA1-213ENST00000519113 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-213ENST00000519113 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
CTNNA1-213ENST00000519113 ZNF56Q15929 161 aa12.61□□□□□ -0.39
CTNNA1-213ENST00000519113 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
CTNNA1-213ENST00000519113 TM2D2Q9BX73 214 aa12.61□□□□□ -0.39
CTNNA1-213ENST00000519113 AP5S1Q9NUS5 200 aa12.61□□□□□ -0.39
CTNNA1-213ENST00000519113 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
CTNNA1-213ENST00000519113 SUMO4Q6EEV6 95 aa12.6□□□□□ -0.39
CTNNA1-213ENST00000519113 C20orf78Q9BR46 151 aa12.6□□□□□ -0.39
CTNNA1-213ENST00000519113 UBR4Q5T4S7 5183 aa12.6□□□□□ -0.39
CTNNA1-213ENST00000519113 Q8N8P6 123 aa12.59□□□□□ -0.39
CTNNA1-213ENST00000519113 RHODO00212 210 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms