RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 APOC4P55056 127 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
PCM1-206ENST00000518537 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
PCM1-206ENST00000518537 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
PCM1-206ENST00000518537 A0A1B0GV90 55 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 DLEU1O43261 78 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 WIPF1O43516 503 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 C3orf56Q8N813 242 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 C2orf91Q6ZV80 131 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
PCM1-206ENST00000518537 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
PCM1-206ENST00000518537 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
PCM1-206ENST00000518537 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
PCM1-206ENST00000518537 CHCHD7Q9BUK0 85 aa11.84□□□□□ -0.51
PCM1-206ENST00000518537 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
PCM1-206ENST00000518537 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
PCM1-206ENST00000518537 X6R8D5 127 aa11.84□□□□□ -0.51
PCM1-206ENST00000518537 TENM1Q9UKZ4 2725 aa11.83□□□□□ -0.52
PCM1-206ENST00000518537 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
PCM1-206ENST00000518537 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
PCM1-206ENST00000518537 COL5A1-AS1Q5SY13 56 aa11.83□□□□□ -0.52
PCM1-206ENST00000518537 PYGO1Q9Y3Y4 419 aa11.83□□□□□ -0.52
PCM1-206ENST00000518537 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 GAGE12JA6NER3 117 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 SIVA1O15304 175 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 GAGE1Q13065 139 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 GAGE4Q13068 117 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 GAGE5Q13069 117 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 GAGE13Q4V321 117 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 VCX2Q9H322 139 aa11.82□□□□□ -0.52
PCM1-206ENST00000518537 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
PCM1-206ENST00000518537 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
PCM1-206ENST00000518537 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
PCM1-206ENST00000518537 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
PCM1-206ENST00000518537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.81□□□□□ -0.52
PCM1-206ENST00000518537 IGKV2-29A2NJV5 120 aaPredicted RBP11.81□□□□□ -0.52
PCM1-206ENST00000518537 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
PCM1-206ENST00000518537 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 UBE2D3P61077 147 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 UBE2D2P62837 147 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
PCM1-206ENST00000518537 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
PCM1-206ENST00000518537 SPANXA1Q9NS26 97 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 ATRQ13535 2644 aa11.8□□□□□ -0.52
PCM1-206ENST00000518537 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 NPSP0C0P6 89 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 FHL2Q14192 279 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
PCM1-206ENST00000518537 PRIMA1Q86XR5 153 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 OR11H2Q8NH07 326 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
PCM1-206ENST00000518537 VWFP04275 2813 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 HERVK_113P61574 105 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 OXLD1Q5BKU9 147 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 LINC00612Q8N6U2 182 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 E9PLD3 99 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 IGHV4-30-4P0DP06 118 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 CRYBA4P53673 196 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 PRADC1Q9BSG0 188 aa11.78□□□□□ -0.52
PCM1-206ENST00000518537 NFE4Q86UQ8 179 aa11.77□□□□□ -0.53
PCM1-206ENST00000518537 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.53
PCM1-206ENST00000518537 AMELXQ99217 191 aa11.77□□□□□ -0.53
PCM1-206ENST00000518537 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.53
PCM1-206ENST00000518537 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
PCM1-206ENST00000518537 NOTCH3Q9UM47 2321 aa11.76□□□□□ -0.53
PCM1-206ENST00000518537 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 HSD52Q0P140 79 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 HIGD1BQ9P298 99 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 A0A0J9YXV3 536 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
PCM1-206ENST00000518537 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
PCM1-206ENST00000518537 NTM-AS1Q6ZSK4 140 aa11.74□□□□□ -0.53
PCM1-206ENST00000518537 Q6ZUT4 128 aa11.74□□□□□ -0.53
PCM1-206ENST00000518537 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
PCM1-206ENST00000518537 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
PCM1-206ENST00000518537 MYMXA0A1B0GTQ4 84 aa11.73□□□□□ -0.53
PCM1-206ENST00000518537 DEFB4AO15263 64 aa11.73□□□□□ -0.53
PCM1-206ENST00000518537 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
PCM1-206ENST00000518537 KRTAP10-11P60412 298 aa11.73□□□□□ -0.53
PCM1-206ENST00000518537 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
PCM1-206ENST00000518537 MIFP14174 115 aa11.72□□□□□ -0.53
PCM1-206ENST00000518537 RNF183Q96D59 192 aa11.72□□□□□ -0.53
PCM1-206ENST00000518537 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
PCM1-206ENST00000518537 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
PCM1-206ENST00000518537 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
PCM1-206ENST00000518537 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
PCM1-206ENST00000518537 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.54
PCM1-206ENST00000518537 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.54
PCM1-206ENST00000518537 TMEM223A0PJW6 202 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms