RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 CHAC1Q9BUX1 264 aa14.17□□□□□ -0.14
HOXA11-202ENST00000517402 CYSRT1A8MQ03 144 aa14.16□□□□□ -0.14
HOXA11-202ENST00000517402 PHLDA1Q8WV24 401 aaPredicted RBP14.15□□□□□ -0.14
HOXA11-202ENST00000517402 OR11H2Q8NH07 326 aa14.15□□□□□ -0.14
HOXA11-202ENST00000517402 ZNRF2Q8NHG8 242 aa14.15□□□□□ -0.14
HOXA11-202ENST00000517402 NOP10Q9NPE3 64 aaKnown RBP14.15□□□□□ -0.14
HOXA11-202ENST00000517402 K7EP13 123 aa14.14□□□□□ -0.15
HOXA11-202ENST00000517402 CEMP1Q6PRD7 247 aaPredicted RBP14.14□□□□□ -0.15
HOXA11-202ENST00000517402 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
HOXA11-202ENST00000517402 ORAOV1Q8WV07 137 aa14.14□□□□□ -0.15
HOXA11-202ENST00000517402 CSNK1G2-AS1Q8NCQ2 148 aa14.14□□□□□ -0.15
HOXA11-202ENST00000517402 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
HOXA11-202ENST00000517402 PLAC8L1A1L4L8 177 aa14.13□□□□□ -0.15
HOXA11-202ENST00000517402 IGLV4-3A0A075B6K6 122 aa14.12□□□□□ -0.15
HOXA11-202ENST00000517402 E9PLD3 99 aa14.12□□□□□ -0.15
HOXA11-202ENST00000517402 SEC11AP67812 179 aa14.12□□□□□ -0.15
HOXA11-202ENST00000517402 HIGD1BQ9P298 99 aa14.12□□□□□ -0.15
HOXA11-202ENST00000517402 GAGE1Q13065 139 aa14.12□□□□□ -0.15
HOXA11-202ENST00000517402 CRLF1O75462 422 aa14.11□□□□□ -0.15
HOXA11-202ENST00000517402 GCSHP23434 173 aa14.11□□□□□ -0.15
HOXA11-202ENST00000517402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.11□□□□□ -0.15
HOXA11-202ENST00000517402 FAM104AQ969W3 186 aa14.11□□□□□ -0.15
HOXA11-202ENST00000517402 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
HOXA11-202ENST00000517402 TMEM170BQ5T4T1 132 aa14.11□□□□□ -0.15
HOXA11-202ENST00000517402 CHCHD7Q9BUK0 85 aa14.11□□□□□ -0.15
HOXA11-202ENST00000517402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.1□□□□□ -0.15
HOXA11-202ENST00000517402 IGKV2-29A2NJV5 120 aaPredicted RBP14.1□□□□□ -0.15
HOXA11-202ENST00000517402 FXYD2P54710 66 aa14.1□□□□□ -0.15
HOXA11-202ENST00000517402 C1QTNF4Q9BXJ3 329 aa14.09□□□□□ -0.15
HOXA11-202ENST00000517402 MYMXA0A1B0GTQ4 84 aa14.09□□□□□ -0.15
HOXA11-202ENST00000517402 C16orf74Q96GX8 76 aa14.09□□□□□ -0.15
HOXA11-202ENST00000517402 PAPPA-AS1Q5QFB9 102 aa14.08□□□□□ -0.16
HOXA11-202ENST00000517402 NBEAL2Q6ZNJ1 2754 aa14.08□□□□□ -0.16
HOXA11-202ENST00000517402 DNAJC30Q96LL9 226 aa14.08□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE12BA1L429 117 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 A6NDN8 102 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE7O76087 117 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE12FP0CL80 117 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE12GP0CL81 117 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE12IP0CL82 117 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 DAZ2Q13117 558 aaKnown RBP14.07□□□□□ -0.16
HOXA11-202ENST00000517402 RRN3P1Q2M238 152 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 VCX2Q9H322 139 aa14.07□□□□□ -0.16
HOXA11-202ENST00000517402 TRAV4A0A0B4J268 109 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 FOSL1P15407 271 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 TSPEAR-AS2P59090 65 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 COTL1Q14019 142 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 NAA38Q9BRA0 125 aaKnown RBP14.06□□□□□ -0.16
HOXA11-202ENST00000517402 A0A0J9YXV3 536 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 ZNF815PA8K554 130 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 K7EQD1 137 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 SLC25A29Q8N8R3 303 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 UBE2D4Q9Y2X8 147 aa14.06□□□□□ -0.16
HOXA11-202ENST00000517402 CCL25O15444 150 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 VAMP3Q15836 100 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 RAB37Q96AX2 223 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 PLEKHB2Q96CS7 222 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 PYGO1Q9Y3Y4 419 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 TRGV2A0A075B6R0 118 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 NFE4Q86UQ8 179 aa14.05□□□□□ -0.16
HOXA11-202ENST00000517402 HERVK_113P61574 105 aa14.04□□□□□ -0.16
HOXA11-202ENST00000517402 MAST4O15021 2626 aa14.04□□□□□ -0.16
HOXA11-202ENST00000517402 TRBV7-3A0A075B6L6 115 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 K7ERJ3 54 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 CEND1Q8N111 149 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 CITED1Q99966 193 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 IGHV3-64A0A075B6Q5 118 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 ZNF22P17026 224 aaPredicted RBP14.03□□□□□ -0.16
HOXA11-202ENST00000517402 Q6ZUT4 128 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 AMELXQ99217 191 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 HIST1H4GQ99525 98 aa14.03□□□□□ -0.16
HOXA11-202ENST00000517402 PTTG1IPP53801 180 aa14.02□□□□□ -0.16
HOXA11-202ENST00000517402 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 GAGE4Q13068 117 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 GAGE5Q13069 117 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 UBE2V1Q13404 147 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 GAGE13Q4V321 117 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 AMMECR1LQ6DCA0 310 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 SCGB1D4Q6XE38 83 aa14.02□□□□□ -0.17
HOXA11-202ENST00000517402 H3BRM9 83 aa14.01□□□□□ -0.17
HOXA11-202ENST00000517402 RPL36AP83881 106 aaKnown RBP14.01□□□□□ -0.17
HOXA11-202ENST00000517402 RPL36ALQ969Q0 106 aaKnown RBP14.01□□□□□ -0.17
HOXA11-202ENST00000517402 TM2D2Q9BX73 214 aa14.01□□□□□ -0.17
HOXA11-202ENST00000517402 LOC100131303A0A0U1RQF7 123 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 INSL3P51460 131 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 NHP2Q9NX24 153 aaKnown RBP14□□□□□ -0.17
HOXA11-202ENST00000517402 TMEM223A0PJW6 202 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 H3BUT2 72 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 OVOL2Q9BRP0 275 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 SPANXA1Q9NS26 97 aa14□□□□□ -0.17
HOXA11-202ENST00000517402 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
HOXA11-202ENST00000517402 LINC00694P0DN24 101 aa13.99□□□□□ -0.17
HOXA11-202ENST00000517402 NTM-AS1Q6ZSK4 140 aa13.99□□□□□ -0.17
HOXA11-202ENST00000517402 J3QQQ9 107 aa13.98□□□□□ -0.17
HOXA11-202ENST00000517402 UBE2D3P61077 147 aa13.98□□□□□ -0.17
HOXA11-202ENST00000517402 UBE2D2P62837 147 aa13.98□□□□□ -0.17
HOXA11-202ENST00000517402 C9orf118A6NHY6 69 aa13.97□□□□□ -0.17
HOXA11-202ENST00000517402 MRPS36P82909 103 aaKnown RBP13.97□□□□□ -0.17
HOXA11-202ENST00000517402 TAL2Q16559 108 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms