RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 DEFB121Q5J5C9 76 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DAZ4Q86SG3 579 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 PHLDA1Q8WV24 401 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SPATA25Q9BR10 227 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DAZ3Q9NR90 486 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 CELA1Q9UNI1 258 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 IGHV3-38A0A0C4DH36 116 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PRSS1P07477 247 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 CRYBA4P53673 196 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 LINC01545Q5VT33 79 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 LGALS9CQ6DKI2 356 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 Q6ZN92 141 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TEX43Q6ZNM6 134 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ERASQ7Z444 233 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 SBSPONQ8IVN8 264 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 C20orf203Q8NBC4 194 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 C11orf68Q9H3H3 251 aaKnown RBP5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PRO0255Q9UI72 69 aa5.39□□□□□ -1.55
SCARNA20.1-201ENST00000516009 LOC100131303A0A0U1RQF7 123 aa5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 RPL39P62891 51 aaKnown RBP5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 MRAPQ8TCY5 172 aa5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TMEM141Q96I45 108 aa5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
SCARNA20.1-201ENST00000516009 IGIPA6NJ69 53 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 F5H768 121 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PAX4O43316 350 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 LINC00694P0DN24 101 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 GYPEP15421 78 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 HTN3P15516 51 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 BAALCQ8WXS3 180 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PMCHL2Q9BQD1 86 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TM2D3Q9BRN9 247 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 CHCHD7Q9BUK0 85 aa5.37□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 A0A087WX48 190 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TRAV12-1A0A0B4J245 112 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 A0A0J9YWU9 116 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 HSBP1L1C9JCN9 74 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ODF1Q14990 250 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PMVKQ15126 192 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 C12orf74Q32Q52 190 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TMEM97Q5BJF2 176 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PAPPA-AS1Q5QFB9 102 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 GTSF1LQ9H1H1 148 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PYGO1Q9Y3Y4 419 aa5.36□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TENM3Q9P273 2699 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TRBV25-1A0A075B6N4 114 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TRAV26-1A0A087WT03 109 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 A0A0J9YY99 117 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 IGKV2-29A2NJV5 120 aaPredicted RBP5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PCP4L1A6NKN8 68 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 F8VRH5 84 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TSTD3H0UI37 97 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 DPM2O94777 84 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PKIAP61925 76 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 SPATA45Q537H7 98 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 NTM-AS1Q6ZSK4 140 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ZNF664Q8N3J9 261 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 VSIG2Q96IQ7 327 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TMEM243Q9BU79 118 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PRO1933Q9H354 126 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 SPANXA1Q9NS26 97 aa5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
SCARNA20.1-201ENST00000516009 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 IGLV4-3A0A075B6K6 122 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TRBV6-8A0A0A6YYG3 113 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 hDV102S1A0JD36 115 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 UBE2L6O14933 153 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 IGKCP01834 107 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 NPSP0C0P6 89 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 PLNP26678 52 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 MRPL23Q16540 153 aaKnown RBP5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 MAJINQ3KP22 176 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 C11orf45Q8TAV5 145 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 VCX2Q9H322 139 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
SCARNA20.1-201ENST00000516009 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 H7C423 109 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 FGF6P10767 208 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 NANOS2P60321 138 aaKnown RBP5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 AMMECR1LQ6DCA0 310 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CEMP1Q6PRD7 247 aaPredicted RBP5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 Q6ZTC4 211 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms