RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
PHF3-212ENST00000515594 ZNF462Q96JM2 2506 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 A0A1B0GV72 72 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 IGHV3-33P01772 117 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 VCX2Q9H322 139 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 SETXQ7Z333 2677 aaKnown RBP9.48□□□□□ -0.89
PHF3-212ENST00000515594 SLC25A20O43772 301 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
PHF3-212ENST00000515594 CD28P10747 220 aa9.47□□□□□ -0.89
PHF3-212ENST00000515594 TMEM263Q8WUH6 116 aaKnown RBP9.47□□□□□ -0.89
PHF3-212ENST00000515594 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
PHF3-212ENST00000515594 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
PHF3-212ENST00000515594 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
PHF3-212ENST00000515594 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
PHF3-212ENST00000515594 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
PHF3-212ENST00000515594 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
PHF3-212ENST00000515594 SNRPD3P62318 126 aaKnown RBP9.47□□□□□ -0.89
PHF3-212ENST00000515594 K7EQG2 157 aa9.47□□□□□ -0.89
PHF3-212ENST00000515594 A0A0J9YXY3 114 aa9.46□□□□□ -0.89
PHF3-212ENST00000515594 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.89
PHF3-212ENST00000515594 CRYBA4P53673 196 aa9.46□□□□□ -0.89
PHF3-212ENST00000515594 A0A0U1RRA0 63 aa9.46□□□□□ -0.9
PHF3-212ENST00000515594 H3BUA1 57 aa9.46□□□□□ -0.9
PHF3-212ENST00000515594 I3L3M4 83 aa9.46□□□□□ -0.9
PHF3-212ENST00000515594 LEPROTO15243 131 aa9.46□□□□□ -0.9
PHF3-212ENST00000515594 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
PHF3-212ENST00000515594 NSUN5P1Q3KNT7 163 aa9.46□□□□□ -0.9
PHF3-212ENST00000515594 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
PHF3-212ENST00000515594 TRBV7-9A0A0J9YWB2 115 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 SLURP1P55000 103 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 ATP6V0E2Q8NHE4 81 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 DEFB131AP59861 70 aa9.45□□□□□ -0.9
PHF3-212ENST00000515594 TRIAP1O43715 76 aa9.44□□□□□ -0.9
PHF3-212ENST00000515594 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
PHF3-212ENST00000515594 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
PHF3-212ENST00000515594 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
PHF3-212ENST00000515594 K7EMT4 169 aa9.44□□□□□ -0.9
PHF3-212ENST00000515594 CRLF1O75462 422 aa9.44□□□□□ -0.9
PHF3-212ENST00000515594 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
PHF3-212ENST00000515594 RNF183Q96D59 192 aa9.44□□□□□ -0.9
PHF3-212ENST00000515594 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
PHF3-212ENST00000515594 CLEC2BQ92478 149 aa9.43□□□□□ -0.9
PHF3-212ENST00000515594 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
PHF3-212ENST00000515594 BRI3O95415 125 aa9.43□□□□□ -0.9
PHF3-212ENST00000515594 MTORP42345 2549 aa9.43□□□□□ -0.9
PHF3-212ENST00000515594 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 LITAFQ99732 161 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 NBEAL2Q6ZNJ1 2754 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
PHF3-212ENST00000515594 RHOHQ15669 191 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 NDUFA7O95182 113 aa9.42□□□□□ -0.9
PHF3-212ENST00000515594 M0R2P5 195 aa9.41□□□□□ -0.9
PHF3-212ENST00000515594 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
PHF3-212ENST00000515594 KHDC1LQ5JSQ8 128 aa9.41□□□□□ -0.9
PHF3-212ENST00000515594 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.41□□□□□ -0.9
PHF3-212ENST00000515594 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
PHF3-212ENST00000515594 ACANP16112 2415 aa9.4□□□□□ -0.9
PHF3-212ENST00000515594 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
PHF3-212ENST00000515594 LINC00467Q9BRT7 94 aa9.4□□□□□ -0.9
PHF3-212ENST00000515594 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
PHF3-212ENST00000515594 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
PHF3-212ENST00000515594 LINC01620Q4KN68 170 aa9.4□□□□□ -0.91
PHF3-212ENST00000515594 B4DSR2 109 aa9.39□□□□□ -0.91
PHF3-212ENST00000515594 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
PHF3-212ENST00000515594 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
PHF3-212ENST00000515594 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
PHF3-212ENST00000515594 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
PHF3-212ENST00000515594 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
PHF3-212ENST00000515594 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
PHF3-212ENST00000515594 APCP25054 2843 aa9.37□□□□□ -0.91
PHF3-212ENST00000515594 ITPR3Q14573 2671 aa9.37□□□□□ -0.91
PHF3-212ENST00000515594 COX6A2Q02221 97 aa9.37□□□□□ -0.91
PHF3-212ENST00000515594 GCN1Q92616 2671 aaKnown RBP9.36□□□□□ -0.91
PHF3-212ENST00000515594 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
PHF3-212ENST00000515594 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 IGHV3-53P01767 116 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 ICOSQ9Y6W8 199 aa9.36□□□□□ -0.91
PHF3-212ENST00000515594 H3BMM0 161 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 UBE2E2Q96LR5 201 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 LINC01587Q99440 93 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 TTC32Q5I0X7 151 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 ZNF702PQ9H963 129 aa9.35□□□□□ -0.91
PHF3-212ENST00000515594 H7C423 109 aa9.34□□□□□ -0.91
PHF3-212ENST00000515594 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
PHF3-212ENST00000515594 PRORYQ9H606 182 aa9.34□□□□□ -0.91
PHF3-212ENST00000515594 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
PHF3-212ENST00000515594 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
PHF3-212ENST00000515594 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms