RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 NPVFQ9HCQ7 196 aa-0.73□□□□□ -2.53
CXXC4-203ENST00000515509 GSKIPQ9P0R6 139 aa-0.73□□□□□ -2.53
CXXC4-203ENST00000515509 CHD6Q8TD26 2715 aa-0.73□□□□□ -2.53
CXXC4-203ENST00000515509 PXDNQ92626 1479 aa-0.73□□□□□ -2.53
CXXC4-203ENST00000515509 MYH6P13533 1939 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 KDM3BQ7LBC6 1761 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 M0R2Z0 102 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 NPFFO15130 113 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 ARPC5O15511 151 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 ALX1Q15699 326 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 FHAD1B1AJZ9 1412 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 BCL9LQ86UU0 1499 aa-0.74□□□□□ -2.53
CXXC4-203ENST00000515509 LRP6O75581 1613 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 PLXNB2O15031 1838 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 WNK3Q9BYP7 1800 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 K7ERU9 68 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 SNCGO76070 127 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 C10orf71Q711Q0 1435 aa-0.75□□□□□ -2.53
CXXC4-203ENST00000515509 AKAP14Q86UN6 197 aa-0.76□□□□□ -2.53
CXXC4-203ENST00000515509 IFT140Q96RY7 1462 aa-0.76□□□□□ -2.53
CXXC4-203ENST00000515509 PRDM2Q13029 1718 aa-0.76□□□□□ -2.53
CXXC4-203ENST00000515509 SRRM2Q9UQ35 2752 aaKnown RBP-0.76□□□□□ -2.53
CXXC4-203ENST00000515509 NWD2Q9ULI1 1742 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 MRC1P22897 1456 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 I3L2K1 104 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 SIX6O95475 246 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 PPP1R17O96001 155 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 GUCA1AP43080 201 aaPredicted RBP-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 SEC11CQ9BY50 192 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 AGPAT4-IT1Q9H0P7 198 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 TP53AIP1Q9HCN2 124 aa-0.77□□□□□ -2.53
CXXC4-203ENST00000515509 ZNF518AQ6AHZ1 1483 aa-0.78□□□□□ -2.53
CXXC4-203ENST00000515509 HAMPP81172 84 aa-0.78□□□□□ -2.53
CXXC4-203ENST00000515509 DR1Q01658 176 aa-0.78□□□□□ -2.53
CXXC4-203ENST00000515509 R4GMQ9 66 aa-0.78□□□□□ -2.53
CXXC4-203ENST00000515509 DCHS2Q6V1P9 2916 aa-0.78□□□□□ -2.53
CXXC4-203ENST00000515509 ERCC6L2Q5T890 1561 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 SPAARA0A1B0GVQ0 90 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 HCG22E2RYF7 251 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 M0R135 149 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 KRTAP19-7Q3SYF9 63 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 KCNRGQ8N5I3 272 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 TSTD1Q8NFU3 115 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 SMIM4Q8WVI0 70 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 SDF2Q99470 211 aa-0.79□□□□□ -2.54
CXXC4-203ENST00000515509 LRRC37A2A6NM11 1700 aa-0.8□□□□□ -2.54
CXXC4-203ENST00000515509 S100A3P33764 101 aa-0.8□□□□□ -2.54
CXXC4-203ENST00000515509 SPRR2BP35325 72 aa-0.8□□□□□ -2.54
CXXC4-203ENST00000515509 LZICQ8WZA0 190 aa-0.8□□□□□ -2.54
CXXC4-203ENST00000515509 PLCE1Q9P212 2302 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 CTXND1A0A1B0GTU2 59 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 COPZ1P61923 177 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 RPS25P62851 125 aaKnown RBP-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 DCDP81605 110 aaKnown RBP-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 TPT1P8Q9HAU6 139 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 COPZ2Q9P299 210 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 CEP152O94986 1710 aa-0.81□□□□□ -2.54
CXXC4-203ENST00000515509 USF3Q68DE3 2245 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 K7EQZ3 153 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 TMEM191AQ9H0A3 160 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 LENEPQ9Y5L5 61 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 TENM2Q9NT68 2774 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 MYOM3Q5VTT5 1437 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 ZNF236Q9UL36 1845 aa-0.82□□□□□ -2.54
CXXC4-203ENST00000515509 FXYD6-FXYD2A0A087WZ82 144 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 TRAV13-2A0A0B4J235 113 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 TRBV6-1A0A0K0K1D8 114 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 SMIM21Q3B7S5 101 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 C10orf128Q5T292 105 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 SPAG11AQ6PDA7 123 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 ANP32BQ92688 251 aaKnown RBP-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 TCEAL4Q96EI5 215 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 DPH3Q96FX2 82 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 AMELXQ99217 191 aa-0.83□□□□□ -2.54
CXXC4-203ENST00000515509 SPTBN1Q01082 2364 aaKnown RBP-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 PAPPAQ13219 1627 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 SMCO1Q147U7 214 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 AQP10Q96PS8 301 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 LINC00472Q9H8W2 130 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 MYH8P13535 1937 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 LRP1BQ9NZR2 4599 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 COL6A3P12111 3177 aa-0.84□□□□□ -2.54
CXXC4-203ENST00000515509 SPEF2Q9C093 1822 aa-0.85□□□□□ -2.54
CXXC4-203ENST00000515509 RBM3P98179 157 aaKnown RBP-0.85□□□□□ -2.55
CXXC4-203ENST00000515509 CSPG4Q6UVK1 2322 aa-0.85□□□□□ -2.55
CXXC4-203ENST00000515509 V9GYH0 126 aa-0.85□□□□□ -2.55
CXXC4-203ENST00000515509 COX17Q14061 63 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 PIGYQ3MUY2 71 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 TMEM170BQ5T4T1 132 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 TTC9CQ8N5M4 171 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 CCDC167Q9P0B6 97 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 APC2O95996 2303 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 ARAP2Q8WZ64 1704 aa-0.86□□□□□ -2.55
CXXC4-203ENST00000515509 MAP1BP46821 2468 aaKnown RBP-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 PPIP5K1Q6PFW1 1433 aa-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 HIST1H1DP16402 221 aaKnown RBP-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 Q6JHZ5 121 aa-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 Q8N8P6 123 aa-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 MAFIPQ8WZ33 124 aa-0.87□□□□□ -2.55
CXXC4-203ENST00000515509 DOCK1Q14185 1865 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms