RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 R4GMQ9 66 aa-0.13□□□□□ -2.43
NEDD4-211ENST00000514893 CEP152O94986 1710 aa-0.13□□□□□ -2.43
NEDD4-211ENST00000514893 FLNAP21333 2647 aaKnown RBP-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 TRAV13-2A0A0B4J235 113 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 FAM25AB3EWG3 89 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 FAM25CB3EWG5 89 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 FAM25GB3EWG6 89 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 BCE1O60756 84 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 TSPAN19P0C672 248 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 CCL18P55774 89 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 TTC9CQ8N5M4 171 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 TCEAL4Q96EI5 215 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 V9GYH0 126 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 ARAP2Q8WZ64 1704 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 MYOM3Q5VTT5 1437 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 SPTBN2O15020 2390 aa-0.14□□□□□ -2.43
NEDD4-211ENST00000514893 CHD6Q8TD26 2715 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 ZNF518AQ6AHZ1 1483 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 UNC13AQ9UPW8 1703 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 PTPRQQ9UMZ3 2332 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 LRP6O75581 1613 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 PIGBOS1A0A0B4J2F0 54 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 LOC730098B7Z3J9 87 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 HCG22E2RYF7 251 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 M0R135 149 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 CCL8P80075 99 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 DCDP81605 110 aaKnown RBP-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 SPAG11AQ6PDA7 123 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 SMIM4Q8WVI0 70 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 AGPAT4-IT1Q9H0P7 198 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 FXYD6Q9H0Q3 95 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 FAM208BQ5VWN6 2430 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 AKAP6Q13023 2319 aa-0.15□□□□□ -2.43
NEDD4-211ENST00000514893 ARPC4P59998 168 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 TMEM170BQ5T4T1 132 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 TMEM191AQ9H0A3 160 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 KIAA0100Q14667 2235 aaKnown RBP-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 WNK3Q9BYP7 1800 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 C10orf71Q711Q0 1435 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 KMT2AQ03164 3969 aa-0.16□□□□□ -2.44
NEDD4-211ENST00000514893 ZNF236Q9UL36 1845 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 SPRR1AP35321 89 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 COPS9Q8WXC6 57 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 TP53AIP1Q9HCN2 124 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 CCDC167Q9P0B6 97 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 ZANQ9Y493 2812 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 KDM3BQ7LBC6 1761 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 IFT140Q96RY7 1462 aa-0.17□□□□□ -2.44
NEDD4-211ENST00000514893 DCHS2Q6V1P9 2916 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 DOPEY2Q9Y3R5 2298 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 TRBV6-1A0A0K0K1D8 114 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 MIF4GDA9UHW6 222 aaKnown RBP-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 SIX6O95475 246 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 TNFP01375 233 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 COX17Q14061 63 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 Q5VSD8 79 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 Q5VV11 94 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 Q6JHZ5 121 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 FAM107BQ9H098 131 aa-0.18□□□□□ -2.44
NEDD4-211ENST00000514893 PPIP5K1Q6PFW1 1433 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 PIEZO2Q9H5I5 2752 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 DOCK2Q92608 1830 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 K7EQZ3 153 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 APOC3P02656 99 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 PIGYQ3MUY2 71 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 TSLPQ969D9 159 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 SDF2Q99470 211 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 LENEPQ9Y5L5 61 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 GRIN2AQ12879 1464 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 KIF21AQ7Z4S6 1674 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 DOCK1Q14185 1865 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 PKDREJQ9NTG1 2253 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 LRRC37A2A6NM11 1700 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 HMCN2Q8NDA2 5059 aa-0.19□□□□□ -2.44
NEDD4-211ENST00000514893 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 PXDNQ92626 1479 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 GNG7O60262 68 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 PRM1P04553 51 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 ALX1Q15699 326 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 C12orf73Q69YU5 71 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 LSM10Q969L4 123 aaKnown RBP-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 ARL11Q969Q4 196 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 DPH3Q96FX2 82 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 CSMD3Q7Z407 3707 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 VWFP04275 2813 aa-0.2□□□□□ -2.44
NEDD4-211ENST00000514893 PHLPP1O60346 1717 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 CFTRP13569 1480 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 C2CD3Q4AC94 2353 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 PLXNB2O15031 1838 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 TSC2P49815 1807 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 PATJQ8NI35 1801 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 LOC105371267A0A1B0GV96 52 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 F8VRH5 84 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 SPRR2DP22532 72 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 MEIG1Q5JSS6 88 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 Q8N8P6 123 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms