RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 C10orf126Q8N4M7 172 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 C20orf78Q9BR46 151 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 RPS10P5Q9NQ39 176 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 Q9UF83 564 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 LAMTOR2Q9Y2Q5 125 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 I3L3M4 83 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 VCYO14598 125 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 MT-ND6P03923 174 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 CKS2P33552 79 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 IQCJQ1A5X6 159 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
SMAD1-213ENST00000514778 OR10J3Q5JRS4 329 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 ORMDL3Q8N138 153 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 GNB1LQ9BYB4 327 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 ST20Q9HBF5 79 aa4.84□□□□□ -1.63
SMAD1-213ENST00000514778 NACAE9PAV3 2078 aa4.84□□□□□ -1.64
SMAD1-213ENST00000514778 TRBV25-1A0A075B6N4 114 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 TRAV26-2A0A0B4J265 109 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 IGHV1-24A0A0C4DH33 117 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 SDHAF1A6NFY7 115 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 PRSS47A8MTI9 375 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 H7C423 109 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 S100A1P23297 94 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 POLR2KP53803 58 aaKnown RBP4.83□□□□□ -1.64
SMAD1-213ENST00000514778 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
SMAD1-213ENST00000514778 COTL1Q14019 142 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 LAGE3Q14657 143 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 ELOBQ15370 118 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 NFE4Q86UQ8 179 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 NRACQ8N912 160 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 URGCP-MRPS24S4R325 110 aa4.83□□□□□ -1.64
SMAD1-213ENST00000514778 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 K7EMI3 77 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 TMEM136Q6ZRR5 245 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 NIT1Q86X76 327 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 RPL39LQ96EH5 51 aaKnown RBP4.82□□□□□ -1.64
SMAD1-213ENST00000514778 LYSTQ99698 3801 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 KIR2DL4Q99706 377 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 TMEM70Q9BUB7 260 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 SMCO4Q9NRQ5 59 aa4.82□□□□□ -1.64
SMAD1-213ENST00000514778 IGLV2-18A0A075B6J9 118 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 A0A087WX48 190 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 IBA57-AS1B1ANH7 110 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 D6R8Y8 96 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 TNFRSF6BO95407 300 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 APCSP02743 223 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 PMCHP20382 165 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 RPS10P46783 165 aaKnown RBP4.81□□□□□ -1.64
SMAD1-213ENST00000514778 AMTP48728 403 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 C1orf134Q5TEV5 83 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 NTM-AS1Q6ZSK4 140 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 LINC00336Q6ZUF6 198 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 TMEM243Q9BU79 118 aa4.81□□□□□ -1.64
SMAD1-213ENST00000514778 TRAV8-3A0A0A6YYJ7 113 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 TSHBP01222 138 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 ZNF25P17030 456 aaPredicted RBP4.8□□□□□ -1.64
SMAD1-213ENST00000514778 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 PRELID3AQ96N28 172 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 COX11Q9Y6N1 276 aa4.8□□□□□ -1.64
SMAD1-213ENST00000514778 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
SMAD1-213ENST00000514778 TMEM262E9PQX1 116 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 SMKR1H3BMG3 65 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 UBE2L6O14933 153 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 ESDP10768 282 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 G0S2P27469 103 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 FCER1GP30273 86 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 Q0VG73 95 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 TMEM18Q96B42 140 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 YPEL4Q96NS1 127 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 SMIM2Q9BVW6 85 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 MAP1LC3AQ9H492 121 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
SMAD1-213ENST00000514778 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
SMAD1-213ENST00000514778 LINC01549A6NIU2 74 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 M0R2N4 97 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 NPYP01303 97 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
SMAD1-213ENST00000514778 RBX1P62877 108 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 ATRAIDQ6UW56 229 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
SMAD1-213ENST00000514778 Q8N8P6 123 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 RMI2Q96E14 147 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 ALKBH7Q9BT30 221 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-213ENST00000514778 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
SMAD1-213ENST00000514778 NXT2Q9NPJ8 142 aaKnown RBP4.78□□□□□ -1.64
SMAD1-213ENST00000514778 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
SMAD1-213ENST00000514778 TRAV8-4A0A0B4J246 113 aa4.77□□□□□ -1.65
SMAD1-213ENST00000514778 RTL8CO15255 209 aa4.77□□□□□ -1.65
SMAD1-213ENST00000514778 IGHV3-30P01768 117 aa4.77□□□□□ -1.65
SMAD1-213ENST00000514778 IGHV3-33P01772 117 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms