RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 LINC00574Q9H8X3 128 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 PRRC2AP48634 2157 aaKnown RBP5.14□□□□□ -1.59
NIPBL-208ENST00000514335 HECTD1Q9ULT8 2610 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 FBXL19-AS1Q494R0 122 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 Q5VV11 94 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 ZNF580Q9UK33 172 aa5.14□□□□□ -1.59
NIPBL-208ENST00000514335 TRGV8A0A0C4DH27 118 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 A0A0J9YY99 117 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.13□□□□□ -1.59
NIPBL-208ENST00000514335 WFDC9Q8NEX5 89 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 SCXQ7RTU7 201 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 C8orf49Q96NF6 230 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
NIPBL-208ENST00000514335 SPEGQ15772 3267 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 TENM4Q6N022 2769 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 Q6ZTC4 211 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 C1orf147Q96MC9 270 aaPredicted RBP5.12□□□□□ -1.59
NIPBL-208ENST00000514335 LINC00846Q9NV44 126 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 PTPN13Q12923 2485 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 MYO9AB2RTY4 2548 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 ITPR1Q14643 2758 aa5.12□□□□□ -1.59
NIPBL-208ENST00000514335 URB1O60287 2271 aaKnown RBP5.11□□□□□ -1.59
NIPBL-208ENST00000514335 COX6B1P14854 86 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 IGLV3-21P80748 117 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-208ENST00000514335 FAM53AQ6NSI3 398 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-208ENST00000514335 DYNLRB2Q8TF09 96 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 ZNF702PQ9H963 129 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 FRYQ5TBA9 3013 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 ZZEF1O43149 2961 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 D6R8Y8 96 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 PLNP26678 52 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 FHL1Q13642 323 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 KLHL30-AS1Q8NEE0 82 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 RETNLBQ9BQ08 111 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 ICOSQ9Y6W8 199 aa5.11□□□□□ -1.59
NIPBL-208ENST00000514335 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 C14orf178Q8N769 122 aaPredicted RBP5.1□□□□□ -1.59
NIPBL-208ENST00000514335 RPP21Q9H633 154 aaKnown RBP5.1□□□□□ -1.59
NIPBL-208ENST00000514335 C7orf69Q9H7B7 122 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 ARFGEF3Q5TH69 2177 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 C2CD3Q4AC94 2353 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 LY6HO94772 140 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 ACACAQ13085 2346 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 COX6CP09669 75 aa5.1□□□□□ -1.59
NIPBL-208ENST00000514335 DSPP15924 2871 aaKnown RBP5.09□□□□□ -1.59
NIPBL-208ENST00000514335 PMS2P5A8MQ11 134 aa5.09□□□□□ -1.59
NIPBL-208ENST00000514335 TMEM14BQ9NUH8 114 aa5.09□□□□□ -1.59
NIPBL-208ENST00000514335 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.59
NIPBL-208ENST00000514335 CCL4L1Q8NHW4 92 aa5.09□□□□□ -1.6
NIPBL-208ENST00000514335 NBEAQ8NFP9 2946 aa5.09□□□□□ -1.6
NIPBL-208ENST00000514335 ASCC3Q8N3C0 2202 aaKnown RBP5.08□□□□□ -1.6
NIPBL-208ENST00000514335 ASXL3Q9C0F0 2248 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 TRAV12-3A0A0B4J271 114 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 BCE1O60756 84 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 ARTNQ5T4W7 220 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 IGHV3OR16-13A0A075B7E8 117 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 DNAL4O96015 105 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 MOBPQ13875 183 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 LINC00322Q6ZN03 302 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-208ENST00000514335 ZNF826PQ6ZT77 177 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 C11orf21Q9P2W6 132 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 KNTC1P50748 2209 aa5.08□□□□□ -1.6
NIPBL-208ENST00000514335 CACNA1EQ15878 2313 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 DOPEY2Q9Y3R5 2298 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 C3orf84H3BNL1 204 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 GFRA4Q9GZZ7 299 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 C22orf24Q9Y442 160 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 CADP27708 2225 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 SDK1Q7Z5N4 2213 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 TRBV7-4A0A0J9YYF1 115 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 ENHOQ6UWT2 76 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 C20orf203Q8NBC4 194 aa5.07□□□□□ -1.6
NIPBL-208ENST00000514335 AKAP13Q12802 2813 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 M0R1W7 72 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 LHBP01229 141 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 U3KQK5 164 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 PIEZO2Q9H5I5 2752 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 SPTAN1Q13813 2472 aaKnown RBP5.06□□□□□ -1.6
NIPBL-208ENST00000514335 C9orf116Q5BN46 136 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-208ENST00000514335 Q8IYB0 196 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 LINC00476Q8WZB0 136 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 TMEM14AQ9Y6G1 99 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 APC2O95996 2303 aa5.06□□□□□ -1.6
NIPBL-208ENST00000514335 A0A1B0GUT8 65 aa5.05□□□□□ -1.6
NIPBL-208ENST00000514335 F8VRH5 84 aa5.05□□□□□ -1.6
NIPBL-208ENST00000514335 CREBBPQ92793 2442 aa5.05□□□□□ -1.6
NIPBL-208ENST00000514335 ABCA12Q86UK0 2595 aa5.05□□□□□ -1.6
NIPBL-208ENST00000514335 A0A1W2PNU3 283 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-208ENST00000514335 I3L3M4 83 aa5.05□□□□□ -1.6
NIPBL-208ENST00000514335 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
NIPBL-208ENST00000514335 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 ZNF32P17041 273 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 DEFB106AQ8N104 65 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 LYPD1Q8N2G4 141 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms