RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 TINCRA0A1B0GVN0 87 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 G3V4G9 280 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 CIDEAO60543 219 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 COTL1Q14019 142 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 LINC01006Q8NI28 216 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 CHCHD7Q9BUK0 85 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
PROM1-215ENST00000513448 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 PROK1P58294 105 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 KRTAP1-1Q07627 177 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 RNF151Q2KHN1 245 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 C1orf158Q8N1D5 194 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
PROM1-215ENST00000513448 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
PROM1-215ENST00000513448 PGPEP1Q9NXJ5 209 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 Q6ZSN1 163 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 FAM104AQ969W3 186 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 CITED2Q99967 270 aaPredicted RBP6.74□□□□□ -1.33
PROM1-215ENST00000513448 XCL2Q9UBD3 114 aa6.74□□□□□ -1.33
PROM1-215ENST00000513448 ZNF469Q96JG9 3925 aaPredicted RBP6.74□□□□□ -1.33
PROM1-215ENST00000513448 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
PROM1-215ENST00000513448 IGHV1-58A0A0C4DH39 117 aa6.73□□□□□ -1.33
PROM1-215ENST00000513448 AZU1P20160 251 aa6.73□□□□□ -1.33
PROM1-215ENST00000513448 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
PROM1-215ENST00000513448 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
PROM1-215ENST00000513448 ZNF418Q8TF45 676 aaPredicted RBP6.73□□□□□ -1.33
PROM1-215ENST00000513448 YAE1D1Q9NRH1 226 aa6.73□□□□□ -1.33
PROM1-215ENST00000513448 TRBV20-1A0A075B6N2 111 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 J3QR89 54 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 NDUFA7O95182 113 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 PRM2P04554 102 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 UBE2D3P61077 147 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 UBE2D2P62837 147 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
PROM1-215ENST00000513448 C10orf126Q8N4M7 172 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 C1QTNF4Q9BXJ3 329 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
PROM1-215ENST00000513448 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 H3BMG7 143 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 J3QKU1 62 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 IGLV1-51P01701 117 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 IGHV3-30-3P0DP02 117 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 PCP4P48539 62 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 TIRAPP58753 221 aa6.72□□□□□ -1.33
PROM1-215ENST00000513448 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
PROM1-215ENST00000513448 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
PROM1-215ENST00000513448 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.33
PROM1-215ENST00000513448 A0A0B4J2C4 111 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 A0A1W2PRX2 142 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 SAP30O75446 220 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 TSPAN13O95857 204 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 CFC1BP0CG36 223 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 CFC1P0CG37 223 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 HILS1P60008 231 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.33
PROM1-215ENST00000513448 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.33
PROM1-215ENST00000513448 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.33
PROM1-215ENST00000513448 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 TRGV1A0A0A0MS02 117 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 APOMO95445 188 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 FAM19A3Q7Z5A8 133 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 C11orf44Q8N8P7 122 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 RNF183Q96D59 192 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 C16orf74Q96GX8 76 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.34
PROM1-215ENST00000513448 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 K7EQD1 137 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 GEMIN7Q9H840 131 aaKnown RBP6.7□□□□□ -1.34
PROM1-215ENST00000513448 Q9UF83 564 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 PRO0461Q9UI25 63 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
PROM1-215ENST00000513448 TIMM17BO60830 172 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
PROM1-215ENST00000513448 IGHV3OR16-12A0A075B7B8 117 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
PROM1-215ENST00000513448 HERVK_113P63121 156 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 ZFAND6Q6FIF0 208 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 CEMP1Q6PRD7 247 aaPredicted RBP6.69□□□□□ -1.34
PROM1-215ENST00000513448 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 OVOL2Q9BRP0 275 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 SPANXDQ9BXN6 97 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 GTSF1LQ9H1H1 148 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 TLN2Q9Y4G6 2542 aa6.69□□□□□ -1.34
PROM1-215ENST00000513448 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 A4D1N5 150 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 H7C423 109 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 WFDC2Q14508 124 aa6.68□□□□□ -1.34
PROM1-215ENST00000513448 Q6ZUT4 128 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 607.1 ms